Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cntn3Q07409 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cntn3Q07409 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cntn3Q07409 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cntn3Q07409 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cntn3Q07409 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cntn3Q07409 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Cntn3Q07409 Gm11949-201ENSMUST00000117640 372 ntBASIC12.16□□□□□ -0.46
Cntn3Q07409 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.16□□□□□ -0.46
Cntn3Q07409 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cntn3Q07409 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.16□□□□□ -0.46
Cntn3Q07409 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cntn3Q07409 Mir8115-201ENSMUST00000184992 119 ntBASIC12.16□□□□□ -0.46
Cntn3Q07409 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Cntn3Q07409 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC12.16□□□□□ -0.46
Cntn3Q07409 Gm9463-201ENSMUST00000206707 601 ntBASIC12.16□□□□□ -0.46
Cntn3Q07409 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.16□□□□□ -0.46
Cntn3Q07409 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.16□□□□□ -0.46
Cntn3Q07409 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cntn3Q07409 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cntn3Q07409 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cntn3Q07409 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cntn3Q07409 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cntn3Q07409 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.16□□□□□ -0.46
Cntn3Q07409 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cntn3Q07409 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Cntn3Q07409 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.16□□□□□ -0.46
Cntn3Q07409 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cntn3Q07409 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cntn3Q07409 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cntn3Q07409 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cntn3Q07409 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cntn3Q07409 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cntn3Q07409 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cntn3Q07409 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Cntn3Q07409 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.16□□□□□ -0.46
Cntn3Q07409 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn3Q07409 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn3Q07409 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn3Q07409 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn3Q07409 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Cntn3Q07409 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.15□□□□□ -0.46
Cntn3Q07409 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn3Q07409 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn3Q07409 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.15□□□□□ -0.46
Cntn3Q07409 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn3Q07409 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn3Q07409 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.15□□□□□ -0.46
Cntn3Q07409 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Cntn3Q07409 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn3Q07409 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn3Q07409 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.15□□□□□ -0.46
Cntn3Q07409 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Cntn3Q07409 Gm13888-201ENSMUST00000119148 422 ntBASIC12.15□□□□□ -0.46
Cntn3Q07409 Gm11246-201ENSMUST00000120880 345 ntBASIC12.15□□□□□ -0.46
Cntn3Q07409 Gm11836-201ENSMUST00000121022 441 ntBASIC12.15□□□□□ -0.46
Cntn3Q07409 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn3Q07409 Gm26047-201ENSMUST00000157308 113 ntBASIC12.15□□□□□ -0.46
Cntn3Q07409 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.15□□□□□ -0.46
Cntn3Q07409 Gm4654-201ENSMUST00000183305 982 ntBASIC12.15□□□□□ -0.46
Cntn3Q07409 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.15□□□□□ -0.46
Cntn3Q07409 Gm26047-202ENSMUST00000198840 115 ntBASIC12.15□□□□□ -0.46
Cntn3Q07409 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Cntn3Q07409 Gm44545-201ENSMUST00000208262 746 ntBASIC12.15□□□□□ -0.46
Cntn3Q07409 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Cntn3Q07409 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.15□□□□□ -0.46
Cntn3Q07409 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.15□□□□□ -0.46
Cntn3Q07409 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC12.15□□□□□ -0.46
Cntn3Q07409 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn3Q07409 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.15□□□□□ -0.46
Cntn3Q07409 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn3Q07409 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.15□□□□□ -0.46
Cntn3Q07409 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Cntn3Q07409 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.15□□□□□ -0.46
Cntn3Q07409 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn3Q07409 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn3Q07409 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn3Q07409 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn3Q07409 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn3Q07409 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn3Q07409 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn3Q07409 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn3Q07409 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn3Q07409 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn3Q07409 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.15□□□□□ -0.46
Cntn3Q07409 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cntn3Q07409 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cntn3Q07409 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cntn3Q07409 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cntn3Q07409 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cntn3Q07409 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cntn3Q07409 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cntn3Q07409 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cntn3Q07409 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.14□□□□□ -0.47
Cntn3Q07409 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cntn3Q07409 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.14□□□□□ -0.47
Cntn3Q07409 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.14□□□□□ -0.47
Cntn3Q07409 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cntn3Q07409 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Cntn3Q07409 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms