Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Msx2Q03358 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Msx2Q03358 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Msx2Q03358 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC11.18□□□□□ -0.62
Msx2Q03358 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Msx2Q03358 Gm37954-201ENSMUST00000195400 2071 ntBASIC11.18□□□□□ -0.62
Msx2Q03358 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Msx2Q03358 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Msx2Q03358 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Msx2Q03358 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.18□□□□□ -0.62
Msx2Q03358 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Msx2Q03358 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Msx2Q03358 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.18□□□□□ -0.62
Msx2Q03358 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.18□□□□□ -0.62
Msx2Q03358 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.18□□□□□ -0.62
Msx2Q03358 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Msx2Q03358 Gm22018-201ENSMUST00000104357 131 ntBASIC11.18□□□□□ -0.62
Msx2Q03358 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Msx2Q03358 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.18□□□□□ -0.62
Msx2Q03358 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.18□□□□□ -0.62
Msx2Q03358 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Msx2Q03358 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Msx2Q03358 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.18□□□□□ -0.62
Msx2Q03358 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.18□□□□□ -0.62
Msx2Q03358 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.18□□□□□ -0.62
Msx2Q03358 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Msx2Q03358 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.18□□□□□ -0.62
Msx2Q03358 Gm37008-201ENSMUST00000195712 319 ntBASIC11.18□□□□□ -0.62
Msx2Q03358 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Msx2Q03358 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.18□□□□□ -0.62
Msx2Q03358 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.18□□□□□ -0.62
Msx2Q03358 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Msx2Q03358 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Msx2Q03358 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.18□□□□□ -0.62
Msx2Q03358 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Msx2Q03358 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.18□□□□□ -0.62
Msx2Q03358 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Msx2Q03358 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Msx2Q03358 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Msx2Q03358 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Msx2Q03358 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Msx2Q03358 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Msx2Q03358 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Msx2Q03358 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.18□□□□□ -0.62
Msx2Q03358 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Msx2Q03358 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.18□□□□□ -0.62
Msx2Q03358 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC11.18□□□□□ -0.62
Msx2Q03358 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Msx2Q03358 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Msx2Q03358 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Msx2Q03358 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Msx2Q03358 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Msx2Q03358 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Msx2Q03358 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Msx2Q03358 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Msx2Q03358 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Msx2Q03358 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Msx2Q03358 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Msx2Q03358 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Msx2Q03358 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Msx2Q03358 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.17□□□□□ -0.62
Msx2Q03358 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Msx2Q03358 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.17□□□□□ -0.62
Msx2Q03358 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Msx2Q03358 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Msx2Q03358 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.17□□□□□ -0.62
Msx2Q03358 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Msx2Q03358 Gm10434-201ENSMUST00000101158 471 ntBASIC11.17□□□□□ -0.62
Msx2Q03358 Gm25214-201ENSMUST00000104573 129 ntBASIC11.17□□□□□ -0.62
Msx2Q03358 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Msx2Q03358 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Msx2Q03358 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.17□□□□□ -0.62
Msx2Q03358 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Msx2Q03358 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.17□□□□□ -0.62
Msx2Q03358 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.17□□□□□ -0.62
Msx2Q03358 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.17□□□□□ -0.62
Msx2Q03358 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Msx2Q03358 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.17□□□□□ -0.62
Msx2Q03358 Gm6266-201ENSMUST00000203844 806 ntBASIC11.17□□□□□ -0.62
Msx2Q03358 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.17□□□□□ -0.62
Msx2Q03358 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.17□□□□□ -0.62
Msx2Q03358 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.17□□□□□ -0.62
Msx2Q03358 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Msx2Q03358 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Msx2Q03358 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Msx2Q03358 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Msx2Q03358 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Msx2Q03358 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Msx2Q03358 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Msx2Q03358 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.17□□□□□ -0.62
Msx2Q03358 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Msx2Q03358 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Msx2Q03358 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Msx2Q03358 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Msx2Q03358 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Msx2Q03358 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Msx2Q03358 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Msx2Q03358 Gm44369-201ENSMUST00000204543 2175 ntBASIC11.17□□□□□ -0.62
Msx2Q03358 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC11.17□□□□□ -0.62
Msx2Q03358 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms