Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1sQ02789 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC14.32□□□□□ -0.12
Cacna1sQ02789 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1sQ02789 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1sQ02789 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1sQ02789 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1sQ02789 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC14.32□□□□□ -0.12
Cacna1sQ02789 AC090962.2-201ENSMUST00000225064 1801 ntBASIC14.32□□□□□ -0.12
Cacna1sQ02789 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
Cacna1sQ02789 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1sQ02789 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1sQ02789 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1sQ02789 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cacna1sQ02789 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1sQ02789 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1sQ02789 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1sQ02789 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1sQ02789 Gm13777-201ENSMUST00000118208 345 ntBASIC14.31□□□□□ -0.12
Cacna1sQ02789 Gm8876-201ENSMUST00000120768 1122 ntBASIC14.31□□□□□ -0.12
Cacna1sQ02789 Gm14633-201ENSMUST00000121152 470 ntBASIC14.31□□□□□ -0.12
Cacna1sQ02789 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC14.31□□□□□ -0.12
Cacna1sQ02789 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Cacna1sQ02789 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1sQ02789 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC14.31□□□□□ -0.12
Cacna1sQ02789 Gm8618-201ENSMUST00000097570 432 ntBASIC14.31□□□□□ -0.12
Cacna1sQ02789 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1sQ02789 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1sQ02789 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1sQ02789 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1sQ02789 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1sQ02789 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1sQ02789 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC14.31□□□□□ -0.12
Cacna1sQ02789 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1sQ02789 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1sQ02789 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1sQ02789 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1sQ02789 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1sQ02789 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1sQ02789 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC14.31□□□□□ -0.12
Cacna1sQ02789 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC14.31□□□□□ -0.12
Cacna1sQ02789 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1sQ02789 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.31□□□□□ -0.12
Cacna1sQ02789 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cacna1sQ02789 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1sQ02789 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC14.31□□□□□ -0.12
Cacna1sQ02789 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1sQ02789 Gm6939-201ENSMUST00000122029 864 ntBASIC14.31□□□□□ -0.12
Cacna1sQ02789 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1sQ02789 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC14.31□□□□□ -0.12
Cacna1sQ02789 Gm17107-201ENSMUST00000170983 553 ntBASIC14.31□□□□□ -0.12
Cacna1sQ02789 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC14.31□□□□□ -0.12
Cacna1sQ02789 Gm37009-201ENSMUST00000193297 361 ntBASIC14.31□□□□□ -0.12
Cacna1sQ02789 Gm5311-201ENSMUST00000203518 709 ntBASIC14.31□□□□□ -0.12
Cacna1sQ02789 Gm44236-201ENSMUST00000204492 513 ntBASIC14.31□□□□□ -0.12
Cacna1sQ02789 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1sQ02789 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1sQ02789 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1sQ02789 Gm5739-201ENSMUST00000208601 1703 ntBASIC14.3□□□□□ -0.12
Cacna1sQ02789 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1sQ02789 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1sQ02789 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1sQ02789 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cacna1sQ02789 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.3□□□□□ -0.12
Cacna1sQ02789 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1sQ02789 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1sQ02789 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC14.3□□□□□ -0.12
Cacna1sQ02789 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cacna1sQ02789 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1sQ02789 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1sQ02789 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1sQ02789 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1sQ02789 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1sQ02789 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1sQ02789 Gm17225-201ENSMUST00000172051 497 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1sQ02789 Gm6686-201ENSMUST00000178455 258 ntBASIC14.3□□□□□ -0.12
Cacna1sQ02789 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
Cacna1sQ02789 Gm38145-201ENSMUST00000192319 693 ntBASIC14.3□□□□□ -0.12
Cacna1sQ02789 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Cacna1sQ02789 Rassf6-205ENSMUST00000202704 1178 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Cacna1sQ02789 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1sQ02789 Gm5292-201ENSMUST00000073317 580 ntBASIC14.3□□□□□ -0.12
Cacna1sQ02789 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1sQ02789 Gm23458-201ENSMUST00000083257 169 ntBASIC14.3□□□□□ -0.12
Cacna1sQ02789 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1sQ02789 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cacna1sQ02789 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1sQ02789 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1sQ02789 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.3□□□□□ -0.12
Cacna1sQ02789 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1sQ02789 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1sQ02789 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1sQ02789 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1sQ02789 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1sQ02789 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC14.3□□□□□ -0.12
Cacna1sQ02789 Gm37582-201ENSMUST00000192953 1409 ntBASIC14.3□□□□□ -0.12
Cacna1sQ02789 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC14.3□□□□□ -0.12
Cacna1sQ02789 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cacna1sQ02789 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.3□□□□□ -0.12
Cacna1sQ02789 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1sQ02789 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms