Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Cux2P70298 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cux2P70298 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cux2P70298 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC18.6■□□□□ 0.57
Cux2P70298 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cux2P70298 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC18.6■□□□□ 0.57
Cux2P70298 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cux2P70298 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cux2P70298 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cux2P70298 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC18.6■□□□□ 0.57
Cux2P70298 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cux2P70298 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cux2P70298 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC18.6■□□□□ 0.57
Cux2P70298 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Cux2P70298 Gm4960-201ENSMUST00000182928 1001 ntBASIC18.6■□□□□ 0.57
Cux2P70298 Gm42599-201ENSMUST00000201308 469 ntBASIC18.6■□□□□ 0.57
Cux2P70298 Gm9619-201ENSMUST00000211587 762 ntBASIC18.6■□□□□ 0.57
Cux2P70298 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cux2P70298 AC132384.2-201ENSMUST00000218018 526 ntBASIC18.6■□□□□ 0.57
Cux2P70298 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cux2P70298 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cux2P70298 Gm7701-201ENSMUST00000163185 1479 ntBASIC18.6■□□□□ 0.57
Cux2P70298 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cux2P70298 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC18.6■□□□□ 0.57
Cux2P70298 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cux2P70298 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cux2P70298 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cux2P70298 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Cux2P70298 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cux2P70298 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cux2P70298 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cux2P70298 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC18.6■□□□□ 0.57
Cux2P70298 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Cux2P70298 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cux2P70298 Gm6157-201ENSMUST00000199935 1897 ntBASIC18.59■□□□□ 0.57
Cux2P70298 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cux2P70298 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cux2P70298 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC18.59■□□□□ 0.57
Cux2P70298 Gm16288-201ENSMUST00000137940 367 ntBASIC18.59■□□□□ 0.57
Cux2P70298 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC18.59■□□□□ 0.57
Cux2P70298 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC18.59■□□□□ 0.57
Cux2P70298 Gm44540-201ENSMUST00000205640 354 ntBASIC18.59■□□□□ 0.57
Cux2P70298 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC18.59■□□□□ 0.57
Cux2P70298 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cux2P70298 Gm8730-201ENSMUST00000076373 954 ntBASIC18.59■□□□□ 0.57
Cux2P70298 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cux2P70298 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Cux2P70298 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cux2P70298 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cux2P70298 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cux2P70298 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cux2P70298 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cux2P70298 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cux2P70298 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cux2P70298 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cux2P70298 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cux2P70298 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cux2P70298 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Cux2P70298 Gm13777-201ENSMUST00000118208 345 ntBASIC18.58■□□□□ 0.57
Cux2P70298 Gm12435-201ENSMUST00000118949 1016 ntBASIC18.58■□□□□ 0.57
Cux2P70298 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Cux2P70298 Mir8111-201ENSMUST00000184463 137 ntBASIC18.58■□□□□ 0.57
Cux2P70298 Gm40332-201ENSMUST00000199847 938 ntBASIC18.58■□□□□ 0.57
Cux2P70298 Gm45745-201ENSMUST00000211447 1180 ntBASIC18.58■□□□□ 0.57
Cux2P70298 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC18.58■□□□□ 0.57
Cux2P70298 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cux2P70298 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cux2P70298 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC18.58■□□□□ 0.57
Cux2P70298 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC18.58■□□□□ 0.56
Cux2P70298 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cux2P70298 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cux2P70298 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cux2P70298 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Cux2P70298 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cux2P70298 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cux2P70298 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC18.58■□□□□ 0.56
Cux2P70298 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Cux2P70298 Gm14829-201ENSMUST00000121499 1138 ntBASIC18.57■□□□□ 0.56
Cux2P70298 Gm14148-201ENSMUST00000122433 1008 ntBASIC18.57■□□□□ 0.56
Cux2P70298 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC18.57■□□□□ 0.56
Cux2P70298 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cux2P70298 Gm20091-201ENSMUST00000179683 189 ntBASIC18.57■□□□□ 0.56
Cux2P70298 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC18.57■□□□□ 0.56
Cux2P70298 Gm27833-201ENSMUST00000184285 124 ntBASIC18.57■□□□□ 0.56
Cux2P70298 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cux2P70298 Gm9409-201ENSMUST00000197017 316 ntBASIC18.57■□□□□ 0.56
Cux2P70298 Gm42867-201ENSMUST00000202995 469 ntBASIC18.57■□□□□ 0.56
Cux2P70298 Gm33080-201ENSMUST00000205429 172 ntBASIC18.57■□□□□ 0.56
Cux2P70298 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cux2P70298 AC154433.1-201ENSMUST00000224401 1183 ntBASIC18.57■□□□□ 0.56
Cux2P70298 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Cux2P70298 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cux2P70298 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cux2P70298 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cux2P70298 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cux2P70298 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cux2P70298 Deup1-201ENSMUST00000045513 2583 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Cux2P70298 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cux2P70298 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cux2P70298 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms