Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm44967-201ENSMUST00000207047 631 ntBASIC12.77□□□□□ -0.37
Hmgb1P63158 Gm9797-202ENSMUST00000218003 294 ntBASIC12.77□□□□□ -0.37
Hmgb1P63158 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hmgb1P63158 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hmgb1P63158 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hmgb1P63158 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.77□□□□□ -0.37
Hmgb1P63158 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hmgb1P63158 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.77□□□□□ -0.37
Hmgb1P63158 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Hmgb1P63158 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hmgb1P63158 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hmgb1P63158 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.77□□□□□ -0.37
Hmgb1P63158 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hmgb1P63158 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.77□□□□□ -0.37
Hmgb1P63158 Ccdc71-202ENSMUST00000193170 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hmgb1P63158 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hmgb1P63158 Cd8a-201ENSMUST00000066747 3128 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hmgb1P63158 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.77□□□□□ -0.37
Hmgb1P63158 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.77□□□□□ -0.37
Hmgb1P63158 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgb1P63158 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Hmgb1P63158 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgb1P63158 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgb1P63158 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgb1P63158 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgb1P63158 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Hmgb1P63158 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgb1P63158 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgb1P63158 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgb1P63158 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Hmgb1P63158 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.76□□□□□ -0.37
Hmgb1P63158 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgb1P63158 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgb1P63158 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgb1P63158 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Hmgb1P63158 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Hmgb1P63158 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Hmgb1P63158 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgb1P63158 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgb1P63158 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.76□□□□□ -0.37
Hmgb1P63158 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
Hmgb1P63158 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgb1P63158 Gm45224-201ENSMUST00000208203 414 ntBASIC12.76□□□□□ -0.37
Hmgb1P63158 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.76□□□□□ -0.37
Hmgb1P63158 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgb1P63158 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgb1P63158 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgb1P63158 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.76□□□□□ -0.37
Hmgb1P63158 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Hmgb1P63158 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgb1P63158 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.76□□□□□ -0.37
Hmgb1P63158 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgb1P63158 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Hmgb1P63158 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgb1P63158 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgb1P63158 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgb1P63158 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgb1P63158 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgb1P63158 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgb1P63158 Lrba-206ENSMUST00000195524 3322 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgb1P63158 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgb1P63158 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgb1P63158 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgb1P63158 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgb1P63158 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Hmgb1P63158 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgb1P63158 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgb1P63158 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgb1P63158 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgb1P63158 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Hmgb1P63158 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgb1P63158 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgb1P63158 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgb1P63158 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Hmgb1P63158 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgb1P63158 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgb1P63158 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Hmgb1P63158 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.75□□□□□ -0.37
Hmgb1P63158 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgb1P63158 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgb1P63158 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgb1P63158 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgb1P63158 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgb1P63158 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Hmgb1P63158 Gm13996-201ENSMUST00000118456 430 ntBASIC12.75□□□□□ -0.37
Hmgb1P63158 Gm14723-201ENSMUST00000118686 215 ntBASIC12.75□□□□□ -0.37
Hmgb1P63158 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgb1P63158 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.75□□□□□ -0.37
Hmgb1P63158 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgb1P63158 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgb1P63158 Mir7677-201ENSMUST00000184226 67 ntBASIC12.75□□□□□ -0.37
Hmgb1P63158 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgb1P63158 Gm27320-201ENSMUST00000184892 109 ntBASIC12.75□□□□□ -0.37
Hmgb1P63158 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.75□□□□□ -0.37
Hmgb1P63158 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.75□□□□□ -0.37
Hmgb1P63158 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Hmgb1P63158 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgb1P63158 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC12.75□□□□□ -0.37
Hmgb1P63158 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.75□□□□□ -0.37
Hmgb1P63158 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms