Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.74□□□□□ -0.53
ThraP63058 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ThraP63058 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ThraP63058 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
ThraP63058 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ThraP63058 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ThraP63058 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ThraP63058 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC11.74□□□□□ -0.53
ThraP63058 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.74□□□□□ -0.53
ThraP63058 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.74□□□□□ -0.53
ThraP63058 Gm10051-201ENSMUST00000145209 414 ntBASIC11.74□□□□□ -0.53
ThraP63058 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
ThraP63058 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.74□□□□□ -0.53
ThraP63058 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.74□□□□□ -0.53
ThraP63058 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.74□□□□□ -0.53
ThraP63058 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.74□□□□□ -0.53
ThraP63058 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ThraP63058 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ThraP63058 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ThraP63058 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
ThraP63058 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.74□□□□□ -0.53
ThraP63058 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.74□□□□□ -0.53
ThraP63058 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.74□□□□□ -0.53
ThraP63058 Gm807-202ENSMUST00000224929 408 ntBASIC11.74□□□□□ -0.53
ThraP63058 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.74□□□□□ -0.53
ThraP63058 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ThraP63058 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.74□□□□□ -0.53
ThraP63058 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
ThraP63058 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ThraP63058 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ThraP63058 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ThraP63058 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ThraP63058 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.74□□□□□ -0.53
ThraP63058 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
ThraP63058 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ThraP63058 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
ThraP63058 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ThraP63058 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ThraP63058 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
ThraP63058 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ThraP63058 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
ThraP63058 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ThraP63058 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ThraP63058 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ThraP63058 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
ThraP63058 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
ThraP63058 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ThraP63058 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ThraP63058 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ThraP63058 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
ThraP63058 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ThraP63058 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ThraP63058 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ThraP63058 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ThraP63058 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.73□□□□□ -0.53
ThraP63058 Gm15131-201ENSMUST00000119124 595 ntBASIC11.73□□□□□ -0.53
ThraP63058 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ThraP63058 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.73□□□□□ -0.53
ThraP63058 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
ThraP63058 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.73□□□□□ -0.53
ThraP63058 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.73□□□□□ -0.53
ThraP63058 Mir7032-201ENSMUST00000185154 79 ntBASIC11.73□□□□□ -0.53
ThraP63058 BC043934-202ENSMUST00000185694 2356 ntBASIC11.73□□□□□ -0.53
ThraP63058 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.73□□□□□ -0.53
ThraP63058 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.73□□□□□ -0.53
ThraP63058 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
ThraP63058 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.73□□□□□ -0.53
ThraP63058 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC11.73□□□□□ -0.53
ThraP63058 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ThraP63058 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
ThraP63058 Gm4157-201ENSMUST00000211647 679 ntBASIC11.73□□□□□ -0.53
ThraP63058 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.73□□□□□ -0.53
ThraP63058 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ThraP63058 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
ThraP63058 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.73□□□□□ -0.53
ThraP63058 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ThraP63058 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ThraP63058 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ThraP63058 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
ThraP63058 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ThraP63058 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ThraP63058 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ThraP63058 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ThraP63058 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ThraP63058 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ThraP63058 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ThraP63058 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ThraP63058 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.73□□□□□ -0.53
ThraP63058 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ThraP63058 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ThraP63058 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ThraP63058 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
ThraP63058 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ThraP63058 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
ThraP63058 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.73□□□□□ -0.53
ThraP63058 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ThraP63058 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ThraP63058 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ThraP63058 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
ThraP63058 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms