Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm13549-201ENSMUST00000118339 796 ntBASIC11.85□□□□□ -0.51
Ybx1P62960 Gm14395-201ENSMUST00000120494 563 ntBASIC11.85□□□□□ -0.51
Ybx1P62960 Gm15549-201ENSMUST00000121595 622 ntBASIC11.85□□□□□ -0.51
Ybx1P62960 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.85□□□□□ -0.51
Ybx1P62960 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ybx1P62960 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ybx1P62960 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ybx1P62960 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC11.85□□□□□ -0.51
Ybx1P62960 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.85□□□□□ -0.51
Ybx1P62960 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.85□□□□□ -0.51
Ybx1P62960 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.85□□□□□ -0.51
Ybx1P62960 Gm7959-201ENSMUST00000221823 1078 ntBASIC11.85□□□□□ -0.51
Ybx1P62960 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ybx1P62960 Gm4604-201ENSMUST00000025040 390 ntBASIC11.85□□□□□ -0.51
Ybx1P62960 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ybx1P62960 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ybx1P62960 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ybx1P62960 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ybx1P62960 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ybx1P62960 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ybx1P62960 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ybx1P62960 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ybx1P62960 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Ybx1P62960 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ybx1P62960 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ybx1P62960 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ybx1P62960 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ybx1P62960 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ybx1P62960 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.85□□□□□ -0.51
Ybx1P62960 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ybx1P62960 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ybx1P62960 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ybx1P62960 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ybx1P62960 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ybx1P62960 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ybx1P62960 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ybx1P62960 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.84□□□□□ -0.51
Ybx1P62960 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ybx1P62960 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.84□□□□□ -0.51
Ybx1P62960 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ybx1P62960 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ybx1P62960 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ybx1P62960 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ybx1P62960 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ybx1P62960 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ybx1P62960 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ybx1P62960 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Ybx1P62960 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ybx1P62960 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ybx1P62960 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ybx1P62960 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ybx1P62960 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Ybx1P62960 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ybx1P62960 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ybx1P62960 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ybx1P62960 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ybx1P62960 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC11.84□□□□□ -0.51
Ybx1P62960 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ybx1P62960 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ybx1P62960 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Ybx1P62960 Gm15329-201ENSMUST00000121408 155 ntBASIC11.84□□□□□ -0.51
Ybx1P62960 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ybx1P62960 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC11.84□□□□□ -0.51
Ybx1P62960 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC11.84□□□□□ -0.51
Ybx1P62960 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC11.84□□□□□ -0.51
Ybx1P62960 Gm26047-201ENSMUST00000157308 113 ntBASIC11.84□□□□□ -0.51
Ybx1P62960 Gm25492-201ENSMUST00000157383 129 ntBASIC11.84□□□□□ -0.51
Ybx1P62960 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.84□□□□□ -0.51
Ybx1P62960 Gm20495-201ENSMUST00000173902 235 ntBASIC11.84□□□□□ -0.51
Ybx1P62960 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ybx1P62960 Gm37638-201ENSMUST00000194337 1123 ntBASIC11.84□□□□□ -0.51
Ybx1P62960 Gm26047-202ENSMUST00000198840 115 ntBASIC11.84□□□□□ -0.51
Ybx1P62960 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ybx1P62960 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC11.84□□□□□ -0.51
Ybx1P62960 Gm5468-202ENSMUST00000227851 682 ntBASIC11.84□□□□□ -0.51
Ybx1P62960 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ybx1P62960 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Ybx1P62960 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ybx1P62960 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ybx1P62960 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ybx1P62960 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ybx1P62960 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ybx1P62960 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ybx1P62960 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ybx1P62960 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.84□□□□□ -0.51
Ybx1P62960 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ybx1P62960 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Ybx1P62960 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Ybx1P62960 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ybx1P62960 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ybx1P62960 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ybx1P62960 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Ybx1P62960 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Ybx1P62960 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Ybx1P62960 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Ybx1P62960 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Ybx1P62960 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Ybx1P62960 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Ybx1P62960 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.83□□□□□ -0.51
Ybx1P62960 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms