Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm5P62322 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm5P62322 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm5P62322 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Lsm5P62322 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm5P62322 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Lsm5P62322 Gm2673-201ENSMUST00000120958 1608 ntBASIC9.59□□□□□ -0.87
Lsm5P62322 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm5P62322 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Lsm5P62322 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm5P62322 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm5P62322 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Lsm5P62322 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC9.59□□□□□ -0.87
Lsm5P62322 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Lsm5P62322 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm5P62322 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm5P62322 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm5P62322 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Lsm5P62322 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm5P62322 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Lsm5P62322 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm5P62322 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm5P62322 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm5P62322 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm5P62322 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC9.58□□□□□ -0.88
Lsm5P62322 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm5P62322 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm5P62322 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC9.58□□□□□ -0.88
Lsm5P62322 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm5P62322 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm5P62322 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm5P62322 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
Lsm5P62322 Gm7488-201ENSMUST00000117148 684 ntBASIC9.58□□□□□ -0.88
Lsm5P62322 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC9.58□□□□□ -0.88
Lsm5P62322 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm5P62322 Gm24644-201ENSMUST00000157114 139 ntBASIC9.58□□□□□ -0.88
Lsm5P62322 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC9.58□□□□□ -0.88
Lsm5P62322 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC9.58□□□□□ -0.88
Lsm5P62322 Gm8652-201ENSMUST00000181363 964 ntBASIC9.58□□□□□ -0.88
Lsm5P62322 Gm6439-201ENSMUST00000199849 862 ntBASIC9.58□□□□□ -0.88
Lsm5P62322 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC9.58□□□□□ -0.88
Lsm5P62322 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm5P62322 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm5P62322 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm5P62322 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC9.58□□□□□ -0.88
Lsm5P62322 Gm10268-201ENSMUST00000085340 555 ntBASIC9.58□□□□□ -0.88
Lsm5P62322 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm5P62322 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm5P62322 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm5P62322 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm5P62322 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC9.58□□□□□ -0.88
Lsm5P62322 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Lsm5P62322 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm5P62322 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm5P62322 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Lsm5P62322 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm5P62322 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm5P62322 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm5P62322 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm5P62322 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm5P62322 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm5P62322 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm5P62322 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm5P62322 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Lsm5P62322 Gm8793-201ENSMUST00000183069 1303 ntBASIC9.57□□□□□ -0.88
Lsm5P62322 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm5P62322 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC9.57□□□□□ -0.88
Lsm5P62322 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm5P62322 Gm7841-201ENSMUST00000122108 1629 ntBASIC9.57□□□□□ -0.88
Lsm5P62322 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm5P62322 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm5P62322 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm5P62322 Gm19178-201ENSMUST00000217524 1819 ntBASIC9.57□□□□□ -0.88
Lsm5P62322 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm5P62322 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm5P62322 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm5P62322 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm5P62322 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm5P62322 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Lsm5P62322 Mir1894-201ENSMUST00000122802 81 ntBASIC9.57□□□□□ -0.88
Lsm5P62322 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC9.57□□□□□ -0.88
Lsm5P62322 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC9.57□□□□□ -0.88
Lsm5P62322 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm5P62322 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
Lsm5P62322 Gm38314-201ENSMUST00000195709 625 ntBASIC9.57□□□□□ -0.88
Lsm5P62322 Gm18018-201ENSMUST00000198273 408 ntBASIC9.57□□□□□ -0.88
Lsm5P62322 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC9.57□□□□□ -0.88
Lsm5P62322 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm5P62322 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm5P62322 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm5P62322 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Lsm5P62322 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Lsm5P62322 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
Lsm5P62322 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm5P62322 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC9.57□□□□□ -0.88
Lsm5P62322 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC9.57□□□□□ -0.88
Lsm5P62322 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm5P62322 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm5P62322 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Lsm5P62322 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms