Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sec61a1P61620 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.22□□□□□ -0.77
Sec61a1P61620 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sec61a1P61620 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sec61a1P61620 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sec61a1P61620 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Sec61a1P61620 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sec61a1P61620 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sec61a1P61620 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sec61a1P61620 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Sec61a1P61620 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Sec61a1P61620 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sec61a1P61620 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.21□□□□□ -0.77
Sec61a1P61620 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sec61a1P61620 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Sec61a1P61620 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sec61a1P61620 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sec61a1P61620 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sec61a1P61620 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Sec61a1P61620 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sec61a1P61620 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.21□□□□□ -0.77
Sec61a1P61620 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sec61a1P61620 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.21□□□□□ -0.77
Sec61a1P61620 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sec61a1P61620 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
Sec61a1P61620 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Sec61a1P61620 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sec61a1P61620 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sec61a1P61620 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sec61a1P61620 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.21□□□□□ -0.77
Sec61a1P61620 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Sec61a1P61620 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Sec61a1P61620 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.21□□□□□ -0.77
Sec61a1P61620 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC10.21□□□□□ -0.77
Sec61a1P61620 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Sec61a1P61620 Gm26361-201ENSMUST00000158868 186 ntBASIC10.21□□□□□ -0.77
Sec61a1P61620 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sec61a1P61620 Gm5070-201ENSMUST00000177599 862 ntBASIC10.21□□□□□ -0.77
Sec61a1P61620 Gm2260-201ENSMUST00000184965 657 ntBASIC10.21□□□□□ -0.77
Sec61a1P61620 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.21□□□□□ -0.77
Sec61a1P61620 Gm44651-201ENSMUST00000207343 372 ntBASIC10.21□□□□□ -0.77
Sec61a1P61620 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC10.21□□□□□ -0.77
Sec61a1P61620 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Sec61a1P61620 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sec61a1P61620 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sec61a1P61620 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sec61a1P61620 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sec61a1P61620 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sec61a1P61620 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sec61a1P61620 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.21□□□□□ -0.78
Sec61a1P61620 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sec61a1P61620 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sec61a1P61620 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sec61a1P61620 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sec61a1P61620 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sec61a1P61620 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sec61a1P61620 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.21□□□□□ -0.78
Sec61a1P61620 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.21□□□□□ -0.78
Sec61a1P61620 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sec61a1P61620 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Sec61a1P61620 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sec61a1P61620 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sec61a1P61620 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sec61a1P61620 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.21□□□□□ -0.78
Sec61a1P61620 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Sec61a1P61620 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Sec61a1P61620 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sec61a1P61620 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Sec61a1P61620 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sec61a1P61620 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Sec61a1P61620 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sec61a1P61620 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sec61a1P61620 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Sec61a1P61620 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sec61a1P61620 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a1P61620 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a1P61620 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a1P61620 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a1P61620 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a1P61620 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a1P61620 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Sec61a1P61620 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Sec61a1P61620 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a1P61620 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.2□□□□□ -0.78
Sec61a1P61620 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a1P61620 Gm12286-201ENSMUST00000119246 1002 ntBASIC10.2□□□□□ -0.78
Sec61a1P61620 Gm14208-201ENSMUST00000119645 678 ntBASIC10.2□□□□□ -0.78
Sec61a1P61620 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a1P61620 Gm14017-201ENSMUST00000121934 386 ntBASIC10.2□□□□□ -0.78
Sec61a1P61620 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
Sec61a1P61620 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.2□□□□□ -0.78
Sec61a1P61620 Gm6963-201ENSMUST00000147879 379 ntBASIC10.2□□□□□ -0.78
Sec61a1P61620 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Sec61a1P61620 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.2□□□□□ -0.78
Sec61a1P61620 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC10.2□□□□□ -0.78
Sec61a1P61620 Gm24990-201ENSMUST00000157406 323 ntBASIC10.2□□□□□ -0.78
Sec61a1P61620 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a1P61620 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.2□□□□□ -0.78
Sec61a1P61620 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a1P61620 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms