Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup43P59235 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup43P59235 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.94□□□□□ -0.66
Nup43P59235 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nup43P59235 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nup43P59235 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nup43P59235 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nup43P59235 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nup43P59235 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.93□□□□□ -0.66
Nup43P59235 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nup43P59235 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nup43P59235 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Nup43P59235 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Nup43P59235 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nup43P59235 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nup43P59235 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nup43P59235 Gm14193-201ENSMUST00000105067 153 ntBASIC10.93□□□□□ -0.66
Nup43P59235 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Nup43P59235 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC10.93□□□□□ -0.66
Nup43P59235 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Nup43P59235 Gm13045-201ENSMUST00000119019 712 ntBASIC10.93□□□□□ -0.66
Nup43P59235 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nup43P59235 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.93□□□□□ -0.66
Nup43P59235 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC10.93□□□□□ -0.66
Nup43P59235 Gm12407-201ENSMUST00000180219 324 ntBASIC10.93□□□□□ -0.66
Nup43P59235 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC10.93□□□□□ -0.66
Nup43P59235 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC10.93□□□□□ -0.66
Nup43P59235 Gm43378-201ENSMUST00000199336 582 ntBASIC10.93□□□□□ -0.66
Nup43P59235 Gm9555-201ENSMUST00000200908 583 ntBASIC10.93□□□□□ -0.66
Nup43P59235 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC10.93□□□□□ -0.66
Nup43P59235 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC10.93□□□□□ -0.66
Nup43P59235 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.93□□□□□ -0.66
Nup43P59235 Gm7395-201ENSMUST00000216059 1045 ntBASIC10.93□□□□□ -0.66
Nup43P59235 AC122408.1-201ENSMUST00000218949 218 ntBASIC10.93□□□□□ -0.66
Nup43P59235 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.93□□□□□ -0.66
Nup43P59235 Lect2-202ENSMUST00000225183 823 ntBASIC10.93□□□□□ -0.66
Nup43P59235 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nup43P59235 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.93□□□□□ -0.66
Nup43P59235 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nup43P59235 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Nup43P59235 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nup43P59235 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nup43P59235 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.93□□□□□ -0.66
Nup43P59235 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nup43P59235 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Nup43P59235 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nup43P59235 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nup43P59235 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nup43P59235 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Nup43P59235 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nup43P59235 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nup43P59235 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Nup43P59235 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nup43P59235 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Nup43P59235 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup43P59235 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup43P59235 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup43P59235 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup43P59235 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Nup43P59235 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.92□□□□□ -0.66
Nup43P59235 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.92□□□□□ -0.66
Nup43P59235 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup43P59235 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nup43P59235 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup43P59235 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Nup43P59235 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Nup43P59235 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nup43P59235 Gm6335-201ENSMUST00000118081 1194 ntBASIC10.92□□□□□ -0.66
Nup43P59235 Gm7816-201ENSMUST00000119884 1194 ntBASIC10.92□□□□□ -0.66
Nup43P59235 Gm15542-201ENSMUST00000121585 1194 ntBASIC10.92□□□□□ -0.66
Nup43P59235 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC10.92□□□□□ -0.66
Nup43P59235 Mir6979-201ENSMUST00000183927 56 ntBASIC10.92□□□□□ -0.66
Nup43P59235 Gm43138-201ENSMUST00000199123 708 ntBASIC10.92□□□□□ -0.66
Nup43P59235 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.92□□□□□ -0.66
Nup43P59235 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC10.92□□□□□ -0.66
Nup43P59235 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup43P59235 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Nup43P59235 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Nup43P59235 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nup43P59235 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Nup43P59235 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup43P59235 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.92□□□□□ -0.66
Nup43P59235 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup43P59235 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.92□□□□□ -0.66
Nup43P59235 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Nup43P59235 Gm43289-201ENSMUST00000200537 1475 ntBASIC10.92□□□□□ -0.66
Nup43P59235 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup43P59235 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup43P59235 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup43P59235 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.92□□□□□ -0.66
Nup43P59235 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup43P59235 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup43P59235 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Nup43P59235 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup43P59235 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.92□□□□□ -0.66
Nup43P59235 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Nup43P59235 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nup43P59235 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nup43P59235 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nup43P59235 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms