Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Msh6P54276 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Msh6P54276 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Msh6P54276 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
Msh6P54276 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Msh6P54276 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Msh6P54276 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Msh6P54276 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Msh6P54276 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Msh6P54276 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Msh6P54276 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Msh6P54276 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Msh6P54276 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Msh6P54276 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Msh6P54276 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.58□□□□□ -0.08
Msh6P54276 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Msh6P54276 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.58□□□□□ -0.08
Msh6P54276 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Msh6P54276 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC14.58□□□□□ -0.08
Msh6P54276 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Msh6P54276 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Msh6P54276 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Msh6P54276 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Msh6P54276 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC14.58□□□□□ -0.08
Msh6P54276 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC14.58□□□□□ -0.08
Msh6P54276 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Msh6P54276 Gm23694-201ENSMUST00000179335 110 ntBASIC14.58□□□□□ -0.08
Msh6P54276 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC14.58□□□□□ -0.08
Msh6P54276 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Msh6P54276 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC14.58□□□□□ -0.08
Msh6P54276 Gm42655-201ENSMUST00000202782 1134 ntBASIC14.58□□□□□ -0.08
Msh6P54276 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC14.58□□□□□ -0.08
Msh6P54276 AC158392.3-201ENSMUST00000224271 1284 ntBASIC14.58□□□□□ -0.08
Msh6P54276 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Msh6P54276 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Msh6P54276 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Msh6P54276 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Msh6P54276 Gm19680-201ENSMUST00000095050 1513 ntBASIC14.57□□□□□ -0.08
Msh6P54276 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Msh6P54276 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Msh6P54276 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Msh6P54276 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Msh6P54276 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
Msh6P54276 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Msh6P54276 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Msh6P54276 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Msh6P54276 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Msh6P54276 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Msh6P54276 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Msh6P54276 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Msh6P54276 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Msh6P54276 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Msh6P54276 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Msh6P54276 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Msh6P54276 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Msh6P54276 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Msh6P54276 Gm11619-201ENSMUST00000117474 237 ntBASIC14.57□□□□□ -0.08
Msh6P54276 Gm12712-201ENSMUST00000120676 801 ntBASIC14.57□□□□□ -0.08
Msh6P54276 Gm16030-201ENSMUST00000159098 603 ntBASIC14.57□□□□□ -0.08
Msh6P54276 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC14.57□□□□□ -0.08
Msh6P54276 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC14.57□□□□□ -0.08
Msh6P54276 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC14.57□□□□□ -0.08
Msh6P54276 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC14.57□□□□□ -0.08
Msh6P54276 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC14.57□□□□□ -0.08
Msh6P54276 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC14.57□□□□□ -0.08
Msh6P54276 Gm8181-201ENSMUST00000062242 669 ntBASIC14.57□□□□□ -0.08
Msh6P54276 Gm8894-201ENSMUST00000074642 666 ntBASIC14.57□□□□□ -0.08
Msh6P54276 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Msh6P54276 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Msh6P54276 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Msh6P54276 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Msh6P54276 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Msh6P54276 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Msh6P54276 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Msh6P54276 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Msh6P54276 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Msh6P54276 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Msh6P54276 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Msh6P54276 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Msh6P54276 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Msh6P54276 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Msh6P54276 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Msh6P54276 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Msh6P54276 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Msh6P54276 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Msh6P54276 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Msh6P54276 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Msh6P54276 Rab3c-202ENSMUST00000223922 2398 ntBASIC14.56□□□□□ -0.08
Msh6P54276 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Msh6P54276 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC14.56□□□□□ -0.08
Msh6P54276 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Msh6P54276 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Msh6P54276 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Msh6P54276 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Msh6P54276 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.56□□□□□ -0.08
Msh6P54276 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Msh6P54276 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.56□□□□□ -0.08
Msh6P54276 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Msh6P54276 Gm14993-201ENSMUST00000121180 164 ntBASIC14.56□□□□□ -0.08
Msh6P54276 Mir1905-201ENSMUST00000122779 82 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms