Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC11.54□□□□□ -0.56
Atxn1P54254 Gm14034-201ENSMUST00000120147 551 ntBASIC11.54□□□□□ -0.56
Atxn1P54254 Gm13117-201ENSMUST00000120894 691 ntBASIC11.54□□□□□ -0.56
Atxn1P54254 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC11.54□□□□□ -0.56
Atxn1P54254 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC11.54□□□□□ -0.56
Atxn1P54254 Gm22846-201ENSMUST00000157706 270 ntBASIC11.54□□□□□ -0.56
Atxn1P54254 Gm20414-201ENSMUST00000172918 646 ntBASIC11.54□□□□□ -0.56
Atxn1P54254 Gm7719-201ENSMUST00000182374 975 ntBASIC11.54□□□□□ -0.56
Atxn1P54254 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC11.54□□□□□ -0.56
Atxn1P54254 Gm5714-201ENSMUST00000197343 566 ntBASIC11.54□□□□□ -0.56
Atxn1P54254 Gm43852-201ENSMUST00000202098 917 ntBASIC11.54□□□□□ -0.56
Atxn1P54254 Gm44506-201ENSMUST00000206278 965 ntBASIC11.54□□□□□ -0.56
Atxn1P54254 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Atxn1P54254 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Atxn1P54254 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Atxn1P54254 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Atxn1P54254 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Atxn1P54254 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Atxn1P54254 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Atxn1P54254 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Atxn1P54254 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.54□□□□□ -0.56
Atxn1P54254 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Atxn1P54254 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Atxn1P54254 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Atxn1P54254 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Atxn1P54254 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Atxn1P54254 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Atxn1P54254 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Atxn1P54254 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Atxn1P54254 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Atxn1P54254 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Atxn1P54254 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.53□□□□□ -0.56
Atxn1P54254 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.53□□□□□ -0.56
Atxn1P54254 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Atxn1P54254 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Atxn1P54254 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Atxn1P54254 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Atxn1P54254 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Atxn1P54254 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Atxn1P54254 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Atxn1P54254 Gm22594-201ENSMUST00000104251 130 ntBASIC11.53□□□□□ -0.56
Atxn1P54254 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Atxn1P54254 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Atxn1P54254 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.53□□□□□ -0.56
Atxn1P54254 Gm12712-201ENSMUST00000120676 801 ntBASIC11.53□□□□□ -0.56
Atxn1P54254 Gm10169-201ENSMUST00000121822 348 ntBASIC11.53□□□□□ -0.56
Atxn1P54254 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Atxn1P54254 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Atxn1P54254 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Atxn1P54254 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Atxn1P54254 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Atxn1P54254 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Atxn1P54254 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.53□□□□□ -0.56
Atxn1P54254 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Atxn1P54254 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.53□□□□□ -0.56
Atxn1P54254 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Atxn1P54254 Gm42433-201ENSMUST00000196806 940 ntBASIC11.53□□□□□ -0.56
Atxn1P54254 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Atxn1P54254 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.53□□□□□ -0.56
Atxn1P54254 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.53□□□□□ -0.56
Atxn1P54254 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC11.53□□□□□ -0.56
Atxn1P54254 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC11.53□□□□□ -0.56
Atxn1P54254 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Atxn1P54254 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Atxn1P54254 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Atxn1P54254 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Atxn1P54254 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Atxn1P54254 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Atxn1P54254 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Atxn1P54254 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Atxn1P54254 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.53□□□□□ -0.56
Atxn1P54254 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Atxn1P54254 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Atxn1P54254 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.53□□□□□ -0.56
Atxn1P54254 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Atxn1P54254 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Atxn1P54254 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Atxn1P54254 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Atxn1P54254 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Atxn1P54254 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Atxn1P54254 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.52□□□□□ -0.56
Atxn1P54254 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Atxn1P54254 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Atxn1P54254 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Atxn1P54254 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Atxn1P54254 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Atxn1P54254 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.52□□□□□ -0.56
Atxn1P54254 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Atxn1P54254 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Atxn1P54254 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Atxn1P54254 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.52□□□□□ -0.57
Atxn1P54254 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atxn1P54254 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atxn1P54254 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Atxn1P54254 Gm11619-201ENSMUST00000117474 237 ntBASIC11.52□□□□□ -0.57
Atxn1P54254 Gm15207-201ENSMUST00000119259 442 ntBASIC11.52□□□□□ -0.57
Atxn1P54254 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.52□□□□□ -0.57
Atxn1P54254 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Atxn1P54254 Gm17214-201ENSMUST00000164501 541 ntBASIC11.52□□□□□ -0.57
Atxn1P54254 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms