Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.57□□□□□ -0.56
Fdft1P53798 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.57□□□□□ -0.56
Fdft1P53798 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fdft1P53798 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Fdft1P53798 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Fdft1P53798 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.57□□□□□ -0.56
Fdft1P53798 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.57□□□□□ -0.56
Fdft1P53798 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.57□□□□□ -0.56
Fdft1P53798 Gm2553-201ENSMUST00000215986 605 ntBASIC11.57□□□□□ -0.56
Fdft1P53798 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Fdft1P53798 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fdft1P53798 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fdft1P53798 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fdft1P53798 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fdft1P53798 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fdft1P53798 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fdft1P53798 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fdft1P53798 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Fdft1P53798 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fdft1P53798 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Fdft1P53798 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.57□□□□□ -0.56
Fdft1P53798 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Fdft1P53798 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Fdft1P53798 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fdft1P53798 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fdft1P53798 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Fdft1P53798 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Fdft1P53798 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Fdft1P53798 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Fdft1P53798 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Fdft1P53798 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Fdft1P53798 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Fdft1P53798 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Fdft1P53798 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.56□□□□□ -0.56
Fdft1P53798 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Fdft1P53798 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Fdft1P53798 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Fdft1P53798 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Fdft1P53798 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Fdft1P53798 Gm24749-201ENSMUST00000157838 343 ntBASIC11.56□□□□□ -0.56
Fdft1P53798 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Fdft1P53798 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.56□□□□□ -0.56
Fdft1P53798 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.56□□□□□ -0.56
Fdft1P53798 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Fdft1P53798 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Fdft1P53798 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.56□□□□□ -0.56
Fdft1P53798 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Fdft1P53798 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Fdft1P53798 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.56□□□□□ -0.56
Fdft1P53798 Gm43184-201ENSMUST00000197247 542 ntBASIC11.56□□□□□ -0.56
Fdft1P53798 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Fdft1P53798 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Fdft1P53798 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Fdft1P53798 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Fdft1P53798 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Fdft1P53798 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.56□□□□□ -0.56
Fdft1P53798 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Fdft1P53798 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Fdft1P53798 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Fdft1P53798 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Fdft1P53798 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Fdft1P53798 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Fdft1P53798 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Fdft1P53798 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.56□□□□□ -0.56
Fdft1P53798 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Fdft1P53798 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.56□□□□□ -0.56
Fdft1P53798 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.56□□□□□ -0.56
Fdft1P53798 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.56□□□□□ -0.56
Fdft1P53798 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Fdft1P53798 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Fdft1P53798 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Fdft1P53798 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.55□□□□□ -0.56
Fdft1P53798 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Fdft1P53798 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Fdft1P53798 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.55□□□□□ -0.56
Fdft1P53798 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Fdft1P53798 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.55□□□□□ -0.56
Fdft1P53798 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Fdft1P53798 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Fdft1P53798 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Fdft1P53798 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Fdft1P53798 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.55□□□□□ -0.56
Fdft1P53798 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Fdft1P53798 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.55□□□□□ -0.56
Fdft1P53798 Gm8343-201ENSMUST00000182705 994 ntBASIC11.55□□□□□ -0.56
Fdft1P53798 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.55□□□□□ -0.56
Fdft1P53798 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Fdft1P53798 Gm28071-201ENSMUST00000190355 478 ntBASIC11.55□□□□□ -0.56
Fdft1P53798 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.55□□□□□ -0.56
Fdft1P53798 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Fdft1P53798 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.55□□□□□ -0.56
Fdft1P53798 Gm9797-202ENSMUST00000218003 294 ntBASIC11.55□□□□□ -0.56
Fdft1P53798 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.55□□□□□ -0.56
Fdft1P53798 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.55□□□□□ -0.56
Fdft1P53798 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Fdft1P53798 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Fdft1P53798 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Fdft1P53798 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Fdft1P53798 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Fdft1P53798 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms