Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.42□□□□□ -0.58
Pdx1P52946 Gm12407-201ENSMUST00000180219 324 ntBASIC11.42□□□□□ -0.58
Pdx1P52946 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.42□□□□□ -0.58
Pdx1P52946 Gm10774-201ENSMUST00000188689 204 ntBASIC11.42□□□□□ -0.58
Pdx1P52946 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.42□□□□□ -0.58
Pdx1P52946 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.42□□□□□ -0.58
Pdx1P52946 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.42□□□□□ -0.58
Pdx1P52946 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Pdx1P52946 Gm6108-201ENSMUST00000208365 367 ntBASIC11.42□□□□□ -0.58
Pdx1P52946 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdx1P52946 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.42□□□□□ -0.58
Pdx1P52946 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.42□□□□□ -0.58
Pdx1P52946 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdx1P52946 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Pdx1P52946 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdx1P52946 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdx1P52946 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdx1P52946 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pdx1P52946 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdx1P52946 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pdx1P52946 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Pdx1P52946 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdx1P52946 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdx1P52946 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdx1P52946 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdx1P52946 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdx1P52946 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Pdx1P52946 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Pdx1P52946 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdx1P52946 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.42□□□□□ -0.58
Pdx1P52946 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pdx1P52946 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.42□□□□□ -0.58
Pdx1P52946 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pdx1P52946 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Pdx1P52946 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdx1P52946 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pdx1P52946 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdx1P52946 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pdx1P52946 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Pdx1P52946 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdx1P52946 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.41□□□□□ -0.58
Pdx1P52946 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdx1P52946 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.41□□□□□ -0.58
Pdx1P52946 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Pdx1P52946 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdx1P52946 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pdx1P52946 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.41□□□□□ -0.58
Pdx1P52946 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdx1P52946 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdx1P52946 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Pdx1P52946 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdx1P52946 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdx1P52946 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.41□□□□□ -0.58
Pdx1P52946 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdx1P52946 Gm7150-201ENSMUST00000122032 981 ntBASIC11.41□□□□□ -0.58
Pdx1P52946 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pdx1P52946 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pdx1P52946 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdx1P52946 Gm20426-201ENSMUST00000173657 440 ntBASIC11.41□□□□□ -0.58
Pdx1P52946 Mir3102-201ENSMUST00000175555 104 ntBASIC11.41□□□□□ -0.58
Pdx1P52946 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.41□□□□□ -0.58
Pdx1P52946 Mir6979-201ENSMUST00000183927 56 ntBASIC11.41□□□□□ -0.58
Pdx1P52946 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.41□□□□□ -0.58
Pdx1P52946 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.41□□□□□ -0.58
Pdx1P52946 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pdx1P52946 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pdx1P52946 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdx1P52946 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdx1P52946 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Pdx1P52946 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdx1P52946 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdx1P52946 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Pdx1P52946 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pdx1P52946 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdx1P52946 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Pdx1P52946 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pdx1P52946 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdx1P52946 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdx1P52946 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.41□□□□□ -0.58
Pdx1P52946 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdx1P52946 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdx1P52946 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdx1P52946 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Pdx1P52946 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.41□□□□□ -0.58
Pdx1P52946 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdx1P52946 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdx1P52946 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdx1P52946 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdx1P52946 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdx1P52946 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Pdx1P52946 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pdx1P52946 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdx1P52946 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pdx1P52946 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Pdx1P52946 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Pdx1P52946 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdx1P52946 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdx1P52946 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdx1P52946 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Pdx1P52946 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms