Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.12□□□□□ -0.63
Prox1P48437 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.12□□□□□ -0.63
Prox1P48437 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.12□□□□□ -0.63
Prox1P48437 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prox1P48437 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Prox1P48437 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Prox1P48437 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prox1P48437 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prox1P48437 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Prox1P48437 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Prox1P48437 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prox1P48437 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Prox1P48437 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prox1P48437 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prox1P48437 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Prox1P48437 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prox1P48437 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prox1P48437 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.11□□□□□ -0.63
Prox1P48437 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Prox1P48437 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Prox1P48437 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Prox1P48437 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prox1P48437 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.11□□□□□ -0.63
Prox1P48437 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Prox1P48437 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.11□□□□□ -0.63
Prox1P48437 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Prox1P48437 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prox1P48437 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prox1P48437 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Prox1P48437 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC11.11□□□□□ -0.63
Prox1P48437 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Prox1P48437 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prox1P48437 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Prox1P48437 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Prox1P48437 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Prox1P48437 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prox1P48437 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Prox1P48437 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prox1P48437 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prox1P48437 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Prox1P48437 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prox1P48437 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prox1P48437 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prox1P48437 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Prox1P48437 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prox1P48437 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Prox1P48437 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Prox1P48437 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.11□□□□□ -0.63
Prox1P48437 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Prox1P48437 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.11□□□□□ -0.63
Prox1P48437 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prox1P48437 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Prox1P48437 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prox1P48437 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Prox1P48437 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prox1P48437 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Prox1P48437 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Prox1P48437 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Prox1P48437 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Prox1P48437 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Prox1P48437 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prox1P48437 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Prox1P48437 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Prox1P48437 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prox1P48437 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Prox1P48437 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Prox1P48437 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Prox1P48437 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Prox1P48437 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Prox1P48437 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Prox1P48437 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Prox1P48437 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Prox1P48437 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.1□□□□□ -0.63
Prox1P48437 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Prox1P48437 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Prox1P48437 Gm4986-201ENSMUST00000119731 549 ntBASIC11.1□□□□□ -0.63
Prox1P48437 Gm14832-201ENSMUST00000121289 322 ntBASIC11.1□□□□□ -0.63
Prox1P48437 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.1□□□□□ -0.63
Prox1P48437 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.1□□□□□ -0.63
Prox1P48437 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Prox1P48437 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.1□□□□□ -0.63
Prox1P48437 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.1□□□□□ -0.63
Prox1P48437 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.1□□□□□ -0.63
Prox1P48437 Gm38002-201ENSMUST00000193255 180 ntBASIC11.1□□□□□ -0.63
Prox1P48437 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.1□□□□□ -0.63
Prox1P48437 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Prox1P48437 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.1□□□□□ -0.63
Prox1P48437 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.1□□□□□ -0.63
Prox1P48437 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Prox1P48437 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Prox1P48437 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Prox1P48437 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Prox1P48437 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Prox1P48437 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Prox1P48437 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.1□□□□□ -0.63
Prox1P48437 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Prox1P48437 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Prox1P48437 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Prox1P48437 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.1□□□□□ -0.63
Prox1P48437 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms