Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox2P48432 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox2P48432 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Sox2P48432 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox2P48432 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox2P48432 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.79□□□□□ -0.68
Sox2P48432 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sox2P48432 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.79□□□□□ -0.68
Sox2P48432 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox2P48432 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox2P48432 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox2P48432 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Sox2P48432 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox2P48432 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox2P48432 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox2P48432 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sox2P48432 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox2P48432 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.79□□□□□ -0.68
Sox2P48432 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox2P48432 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Sox2P48432 Gm23931-201ENSMUST00000103842 109 ntBASIC10.79□□□□□ -0.68
Sox2P48432 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Sox2P48432 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.79□□□□□ -0.68
Sox2P48432 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox2P48432 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sox2P48432 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.79□□□□□ -0.68
Sox2P48432 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.79□□□□□ -0.68
Sox2P48432 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sox2P48432 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.79□□□□□ -0.68
Sox2P48432 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.79□□□□□ -0.68
Sox2P48432 Gm43438-201ENSMUST00000198133 379 ntBASIC10.79□□□□□ -0.68
Sox2P48432 Gm8956-201ENSMUST00000203939 825 ntBASIC10.79□□□□□ -0.68
Sox2P48432 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox2P48432 Morn2-202ENSMUST00000227729 656 ntBASIC10.79□□□□□ -0.68
Sox2P48432 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.79□□□□□ -0.68
Sox2P48432 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox2P48432 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox2P48432 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox2P48432 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox2P48432 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox2P48432 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox2P48432 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox2P48432 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.79□□□□□ -0.68
Sox2P48432 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox2P48432 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox2P48432 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Sox2P48432 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sox2P48432 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox2P48432 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sox2P48432 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox2P48432 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox2P48432 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Sox2P48432 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sox2P48432 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.79□□□□□ -0.68
Sox2P48432 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Sox2P48432 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.78□□□□□ -0.68
Sox2P48432 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox2P48432 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sox2P48432 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox2P48432 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sox2P48432 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Sox2P48432 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox2P48432 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox2P48432 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sox2P48432 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox2P48432 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox2P48432 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox2P48432 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox2P48432 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Sox2P48432 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.78□□□□□ -0.68
Sox2P48432 Gm15004-201ENSMUST00000119192 630 ntBASIC10.78□□□□□ -0.68
Sox2P48432 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sox2P48432 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sox2P48432 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox2P48432 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.78□□□□□ -0.68
Sox2P48432 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.78□□□□□ -0.68
Sox2P48432 Gm6439-201ENSMUST00000199849 862 ntBASIC10.78□□□□□ -0.68
Sox2P48432 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sox2P48432 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.78□□□□□ -0.68
Sox2P48432 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.78□□□□□ -0.68
Sox2P48432 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox2P48432 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox2P48432 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox2P48432 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Sox2P48432 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sox2P48432 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.78□□□□□ -0.68
Sox2P48432 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox2P48432 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox2P48432 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.78□□□□□ -0.68
Sox2P48432 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox2P48432 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox2P48432 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox2P48432 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sox2P48432 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox2P48432 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sox2P48432 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sox2P48432 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox2P48432 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox2P48432 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox2P48432 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms