Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps4bP46467 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps4bP46467 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Vps4bP46467 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.74□□□□□ -0.53
Vps4bP46467 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.74□□□□□ -0.53
Vps4bP46467 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps4bP46467 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps4bP46467 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vps4bP46467 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.74□□□□□ -0.53
Vps4bP46467 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps4bP46467 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Vps4bP46467 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vps4bP46467 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vps4bP46467 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Vps4bP46467 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vps4bP46467 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps4bP46467 Gm14130-201ENSMUST00000118417 987 ntBASIC11.74□□□□□ -0.53
Vps4bP46467 Gm22334-201ENSMUST00000158070 133 ntBASIC11.74□□□□□ -0.53
Vps4bP46467 Gm5616-201ENSMUST00000165252 384 ntBASIC11.74□□□□□ -0.53
Vps4bP46467 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Vps4bP46467 Gm8741-201ENSMUST00000174736 384 ntBASIC11.74□□□□□ -0.53
Vps4bP46467 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.74□□□□□ -0.53
Vps4bP46467 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.74□□□□□ -0.53
Vps4bP46467 Gm38117-201ENSMUST00000194653 939 ntBASIC11.74□□□□□ -0.53
Vps4bP46467 Gm5982-201ENSMUST00000196234 512 ntBASIC11.74□□□□□ -0.53
Vps4bP46467 Gm43378-201ENSMUST00000199336 582 ntBASIC11.74□□□□□ -0.53
Vps4bP46467 AY036118-201ENSMUST00000200021 923 ntBASIC11.74□□□□□ -0.53
Vps4bP46467 Gm43947-201ENSMUST00000203019 959 ntBASIC11.74□□□□□ -0.53
Vps4bP46467 Gm29787-201ENSMUST00000222129 849 ntBASIC11.74□□□□□ -0.53
Vps4bP46467 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps4bP46467 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps4bP46467 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps4bP46467 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps4bP46467 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vps4bP46467 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps4bP46467 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Vps4bP46467 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vps4bP46467 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps4bP46467 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps4bP46467 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vps4bP46467 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vps4bP46467 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps4bP46467 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Vps4bP46467 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.73□□□□□ -0.53
Vps4bP46467 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.73□□□□□ -0.53
Vps4bP46467 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Vps4bP46467 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Vps4bP46467 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 Gm14028-201ENSMUST00000117434 479 ntBASIC11.73□□□□□ -0.53
Vps4bP46467 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Vps4bP46467 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.73□□□□□ -0.53
Vps4bP46467 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.73□□□□□ -0.53
Vps4bP46467 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Vps4bP46467 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Vps4bP46467 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.73□□□□□ -0.53
Vps4bP46467 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.73□□□□□ -0.53
Vps4bP46467 Gm29615-201ENSMUST00000185371 697 ntBASIC11.73□□□□□ -0.53
Vps4bP46467 Gm28224-201ENSMUST00000186078 697 ntBASIC11.73□□□□□ -0.53
Vps4bP46467 Gm29001-201ENSMUST00000186177 697 ntBASIC11.73□□□□□ -0.53
Vps4bP46467 Gm28292-201ENSMUST00000186593 697 ntBASIC11.73□□□□□ -0.53
Vps4bP46467 Gm28101-201ENSMUST00000187608 697 ntBASIC11.73□□□□□ -0.53
Vps4bP46467 Gm29076-201ENSMUST00000187689 697 ntBASIC11.73□□□□□ -0.53
Vps4bP46467 Gm28302-201ENSMUST00000187931 697 ntBASIC11.73□□□□□ -0.53
Vps4bP46467 Gm28646-201ENSMUST00000188220 697 ntBASIC11.73□□□□□ -0.53
Vps4bP46467 Gm28205-201ENSMUST00000189177 697 ntBASIC11.73□□□□□ -0.53
Vps4bP46467 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 Gm29032-201ENSMUST00000189797 697 ntBASIC11.73□□□□□ -0.53
Vps4bP46467 Gm28695-201ENSMUST00000190300 697 ntBASIC11.73□□□□□ -0.53
Vps4bP46467 Gm37448-201ENSMUST00000192795 697 ntBASIC11.73□□□□□ -0.53
Vps4bP46467 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.73□□□□□ -0.53
Vps4bP46467 Gm17812-201ENSMUST00000204935 318 ntBASIC11.73□□□□□ -0.53
Vps4bP46467 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.73□□□□□ -0.53
Vps4bP46467 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.73□□□□□ -0.53
Vps4bP46467 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.73□□□□□ -0.53
Vps4bP46467 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.73□□□□□ -0.53
Vps4bP46467 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Vps4bP46467 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps4bP46467 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms