Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hist1h1aP43275 AC129931.1-201ENSMUST00000228865 1861 ntBASIC9.54□□□□□ -0.88
Hist1h1aP43275 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Gm15547-201ENSMUST00000122152 333 ntBASIC9.54□□□□□ -0.88
Hist1h1aP43275 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Gm8062-201ENSMUST00000139696 444 ntBASIC9.54□□□□□ -0.88
Hist1h1aP43275 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC9.54□□□□□ -0.88
Hist1h1aP43275 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Olfr284-202ENSMUST00000206647 966 ntBASIC9.54□□□□□ -0.88
Hist1h1aP43275 Gm18062-201ENSMUST00000208020 547 ntBASIC9.54□□□□□ -0.88
Hist1h1aP43275 Gm18055-201ENSMUST00000208254 547 ntBASIC9.54□□□□□ -0.88
Hist1h1aP43275 Gm30285-201ENSMUST00000214614 422 ntBASIC9.54□□□□□ -0.88
Hist1h1aP43275 AC166349.1-201ENSMUST00000220866 695 ntBASIC9.54□□□□□ -0.88
Hist1h1aP43275 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Gm37348-201ENSMUST00000193104 1789 ntBASIC9.54□□□□□ -0.88
Hist1h1aP43275 Gm43242-201ENSMUST00000199507 1776 ntBASIC9.54□□□□□ -0.88
Hist1h1aP43275 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC9.54□□□□□ -0.88
Hist1h1aP43275 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hist1h1aP43275 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Gm44415-201ENSMUST00000204151 2112 ntBASIC9.53□□□□□ -0.88
Hist1h1aP43275 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
Hist1h1aP43275 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC9.53□□□□□ -0.88
Hist1h1aP43275 Gm13297-201ENSMUST00000120205 934 ntBASIC9.53□□□□□ -0.88
Hist1h1aP43275 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC9.53□□□□□ -0.88
Hist1h1aP43275 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
Hist1h1aP43275 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Gm18893-201ENSMUST00000198416 943 ntBASIC9.53□□□□□ -0.88
Hist1h1aP43275 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC9.53□□□□□ -0.88
Hist1h1aP43275 CT571245.2-201ENSMUST00000218421 305 ntBASIC9.53□□□□□ -0.88
Hist1h1aP43275 Gm8712-201ENSMUST00000221090 701 ntBASIC9.53□□□□□ -0.88
Hist1h1aP43275 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hist1h1aP43275 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms