Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.64□□□□□ -0.55
Fen1P39749 Gm18935-201ENSMUST00000212692 664 ntBASIC11.64□□□□□ -0.55
Fen1P39749 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Fen1P39749 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.64□□□□□ -0.55
Fen1P39749 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.64□□□□□ -0.55
Fen1P39749 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fen1P39749 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Fen1P39749 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fen1P39749 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Fen1P39749 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fen1P39749 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fen1P39749 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fen1P39749 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fen1P39749 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fen1P39749 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fen1P39749 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fen1P39749 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fen1P39749 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Fen1P39749 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fen1P39749 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fen1P39749 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fen1P39749 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Fen1P39749 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Fen1P39749 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.63□□□□□ -0.55
Fen1P39749 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fen1P39749 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.63□□□□□ -0.55
Fen1P39749 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fen1P39749 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fen1P39749 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.63□□□□□ -0.55
Fen1P39749 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.63□□□□□ -0.55
Fen1P39749 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Fen1P39749 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Fen1P39749 Gm22018-201ENSMUST00000104357 131 ntBASIC11.63□□□□□ -0.55
Fen1P39749 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Fen1P39749 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.63□□□□□ -0.55
Fen1P39749 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Fen1P39749 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Fen1P39749 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.63□□□□□ -0.55
Fen1P39749 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.63□□□□□ -0.55
Fen1P39749 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fen1P39749 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.63□□□□□ -0.55
Fen1P39749 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.63□□□□□ -0.55
Fen1P39749 Gm43133-201ENSMUST00000197472 463 ntBASIC11.63□□□□□ -0.55
Fen1P39749 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fen1P39749 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Fen1P39749 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fen1P39749 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Fen1P39749 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.63□□□□□ -0.55
Fen1P39749 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Fen1P39749 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fen1P39749 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Fen1P39749 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fen1P39749 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fen1P39749 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Fen1P39749 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fen1P39749 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fen1P39749 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Fen1P39749 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.63□□□□□ -0.55
Fen1P39749 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Fen1P39749 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fen1P39749 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fen1P39749 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fen1P39749 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fen1P39749 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Fen1P39749 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC11.62□□□□□ -0.55
Fen1P39749 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fen1P39749 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Fen1P39749 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.62□□□□□ -0.55
Fen1P39749 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fen1P39749 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fen1P39749 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fen1P39749 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fen1P39749 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fen1P39749 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.62□□□□□ -0.55
Fen1P39749 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fen1P39749 Gm5419-201ENSMUST00000119301 527 ntBASIC11.62□□□□□ -0.55
Fen1P39749 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.62□□□□□ -0.55
Fen1P39749 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Fen1P39749 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fen1P39749 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.62□□□□□ -0.55
Fen1P39749 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.62□□□□□ -0.55
Fen1P39749 Gm38241-201ENSMUST00000192641 898 ntBASIC11.62□□□□□ -0.55
Fen1P39749 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.62□□□□□ -0.55
Fen1P39749 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.62□□□□□ -0.55
Fen1P39749 Gm9368-201ENSMUST00000219348 831 ntBASIC11.62□□□□□ -0.55
Fen1P39749 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Fen1P39749 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Fen1P39749 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Fen1P39749 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fen1P39749 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Fen1P39749 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.62□□□□□ -0.55
Fen1P39749 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Fen1P39749 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Fen1P39749 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.62□□□□□ -0.55
Fen1P39749 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Fen1P39749 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.62□□□□□ -0.55
Fen1P39749 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fen1P39749 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fen1P39749 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.62□□□□□ -0.55
Fen1P39749 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms