Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxc5P32043 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Hoxc5P32043 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxc5P32043 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxc5P32043 Gm11509-201ENSMUST00000117358 325 ntBASIC10.72□□□□□ -0.69
Hoxc5P32043 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxc5P32043 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Hoxc5P32043 Gm26361-201ENSMUST00000158868 186 ntBASIC10.72□□□□□ -0.69
Hoxc5P32043 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxc5P32043 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Hoxc5P32043 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.72□□□□□ -0.69
Hoxc5P32043 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxc5P32043 Gm9797-202ENSMUST00000218003 294 ntBASIC10.72□□□□□ -0.69
Hoxc5P32043 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.72□□□□□ -0.69
Hoxc5P32043 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxc5P32043 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxc5P32043 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.72□□□□□ -0.69
Hoxc5P32043 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxc5P32043 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.72□□□□□ -0.69
Hoxc5P32043 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxc5P32043 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxc5P32043 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.72□□□□□ -0.69
Hoxc5P32043 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxc5P32043 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxc5P32043 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxc5P32043 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxc5P32043 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxc5P32043 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.72□□□□□ -0.69
Hoxc5P32043 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxc5P32043 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Hoxc5P32043 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxc5P32043 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxc5P32043 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.72□□□□□ -0.69
Hoxc5P32043 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxc5P32043 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxc5P32043 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxc5P32043 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxc5P32043 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.71□□□□□ -0.69
Hoxc5P32043 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxc5P32043 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxc5P32043 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.71□□□□□ -0.69
Hoxc5P32043 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxc5P32043 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxc5P32043 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
Hoxc5P32043 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Hoxc5P32043 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.69
Hoxc5P32043 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxc5P32043 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.71□□□□□ -0.69
Hoxc5P32043 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Hoxc5P32043 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxc5P32043 Mir1938-201ENSMUST00000158746 100 ntBASIC10.71□□□□□ -0.69
Hoxc5P32043 Gm5616-201ENSMUST00000165252 384 ntBASIC10.71□□□□□ -0.69
Hoxc5P32043 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxc5P32043 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Hoxc5P32043 Gm8741-201ENSMUST00000174736 384 ntBASIC10.71□□□□□ -0.69
Hoxc5P32043 Gm25890-201ENSMUST00000177643 165 ntBASIC10.71□□□□□ -0.69
Hoxc5P32043 Rnu1b2-201ENSMUST00000178073 165 ntBASIC10.71□□□□□ -0.69
Hoxc5P32043 Rnu1b1-201ENSMUST00000178250 165 ntBASIC10.71□□□□□ -0.69
Hoxc5P32043 Gm22614-201ENSMUST00000178300 165 ntBASIC10.71□□□□□ -0.69
Hoxc5P32043 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.71□□□□□ -0.69
Hoxc5P32043 Gm27627-201ENSMUST00000183644 150 ntBASIC10.71□□□□□ -0.69
Hoxc5P32043 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Hoxc5P32043 Gm9678-201ENSMUST00000198979 1149 ntBASIC10.71□□□□□ -0.69
Hoxc5P32043 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.71□□□□□ -0.69
Hoxc5P32043 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
Hoxc5P32043 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxc5P32043 Gm21027-201ENSMUST00000219300 1236 ntBASIC10.71□□□□□ -0.69
Hoxc5P32043 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxc5P32043 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.71□□□□□ -0.69
Hoxc5P32043 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Hoxc5P32043 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxc5P32043 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxc5P32043 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxc5P32043 Gm10254-201ENSMUST00000052888 867 ntBASIC10.71□□□□□ -0.69
Hoxc5P32043 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxc5P32043 Gm22042-201ENSMUST00000082989 165 ntBASIC10.71□□□□□ -0.69
Hoxc5P32043 Gm26110-201ENSMUST00000083971 165 ntBASIC10.71□□□□□ -0.69
Hoxc5P32043 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Hoxc5P32043 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hoxc5P32043 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hoxc5P32043 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hoxc5P32043 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Hoxc5P32043 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Hoxc5P32043 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxc5P32043 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxc5P32043 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxc5P32043 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxc5P32043 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxc5P32043 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxc5P32043 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxc5P32043 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxc5P32043 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Hoxc5P32043 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxc5P32043 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxc5P32043 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxc5P32043 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.7□□□□□ -0.7
Hoxc5P32043 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxc5P32043 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxc5P32043 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxc5P32043 Gm13665-201ENSMUST00000120830 528 ntBASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms