Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Col8a2P25318 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC9.64□□□□□ -0.87
Col8a2P25318 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC9.64□□□□□ -0.87
Col8a2P25318 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Col8a2P25318 Gm15549-201ENSMUST00000121595 622 ntBASIC9.64□□□□□ -0.87
Col8a2P25318 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC9.64□□□□□ -0.87
Col8a2P25318 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC9.64□□□□□ -0.87
Col8a2P25318 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Col8a2P25318 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC9.64□□□□□ -0.87
Col8a2P25318 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC9.64□□□□□ -0.87
Col8a2P25318 Gm23045-201ENSMUST00000175041 96 ntBASIC9.64□□□□□ -0.87
Col8a2P25318 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC9.64□□□□□ -0.87
Col8a2P25318 Gm5996-201ENSMUST00000211110 718 ntBASIC9.64□□□□□ -0.87
Col8a2P25318 AC122876.1-201ENSMUST00000217619 825 ntBASIC9.64□□□□□ -0.87
Col8a2P25318 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC9.64□□□□□ -0.87
Col8a2P25318 Gm4978-201ENSMUST00000071565 801 ntBASIC9.64□□□□□ -0.87
Col8a2P25318 Gm43242-201ENSMUST00000199507 1776 ntBASIC9.64□□□□□ -0.87
Col8a2P25318 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Col8a2P25318 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Col8a2P25318 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Col8a2P25318 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Col8a2P25318 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Col8a2P25318 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Col8a2P25318 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Col8a2P25318 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Col8a2P25318 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Col8a2P25318 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Col8a2P25318 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Col8a2P25318 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Col8a2P25318 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Col8a2P25318 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Col8a2P25318 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Col8a2P25318 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC9.63□□□□□ -0.87
Col8a2P25318 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Col8a2P25318 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC9.63□□□□□ -0.87
Col8a2P25318 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Col8a2P25318 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Col8a2P25318 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Col8a2P25318 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Col8a2P25318 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC9.63□□□□□ -0.87
Col8a2P25318 Gm8899-201ENSMUST00000214635 1332 ntBASIC9.63□□□□□ -0.87
Col8a2P25318 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Col8a2P25318 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Col8a2P25318 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC9.63□□□□□ -0.87
Col8a2P25318 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC9.63□□□□□ -0.87
Col8a2P25318 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Col8a2P25318 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Col8a2P25318 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Col8a2P25318 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Col8a2P25318 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Col8a2P25318 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC9.63□□□□□ -0.87
Col8a2P25318 Gm12208-201ENSMUST00000122004 163 ntBASIC9.63□□□□□ -0.87
Col8a2P25318 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Col8a2P25318 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Col8a2P25318 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Col8a2P25318 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Col8a2P25318 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Col8a2P25318 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Col8a2P25318 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Col8a2P25318 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Col8a2P25318 Gm37981-201ENSMUST00000194280 535 ntBASIC9.63□□□□□ -0.87
Col8a2P25318 Gm37826-201ENSMUST00000195329 322 ntBASIC9.63□□□□□ -0.87
Col8a2P25318 Gm44315-201ENSMUST00000203041 219 ntBASIC9.63□□□□□ -0.87
Col8a2P25318 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC9.63□□□□□ -0.87
Col8a2P25318 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Col8a2P25318 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC9.63□□□□□ -0.87
Col8a2P25318 AC102368.1-201ENSMUST00000227161 892 ntBASIC9.63□□□□□ -0.87
Col8a2P25318 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Col8a2P25318 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Col8a2P25318 Gm6430-201ENSMUST00000054664 1248 ntBASIC9.63□□□□□ -0.87
Col8a2P25318 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC9.63□□□□□ -0.87
Col8a2P25318 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Col8a2P25318 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Col8a2P25318 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC9.63□□□□□ -0.87
Col8a2P25318 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Col8a2P25318 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Col8a2P25318 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Col8a2P25318 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Col8a2P25318 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Col8a2P25318 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Col8a2P25318 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
Col8a2P25318 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Col8a2P25318 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
Col8a2P25318 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Col8a2P25318 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Col8a2P25318 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Col8a2P25318 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Col8a2P25318 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Col8a2P25318 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Col8a2P25318 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Col8a2P25318 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC9.62□□□□□ -0.87
Col8a2P25318 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms