Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
TP20293 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.93□□□□□ -0.66
TP20293 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC10.93□□□□□ -0.66
TP20293 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.93□□□□□ -0.66
TP20293 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC10.93□□□□□ -0.66
TP20293 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
TP20293 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
TP20293 Gm24990-201ENSMUST00000157406 323 ntBASIC10.93□□□□□ -0.66
TP20293 Gm17040-202ENSMUST00000170597 889 ntBASIC10.93□□□□□ -0.66
TP20293 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
TP20293 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
TP20293 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC10.93□□□□□ -0.66
TP20293 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC10.93□□□□□ -0.66
TP20293 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
TP20293 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
TP20293 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.93□□□□□ -0.66
TP20293 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.93□□□□□ -0.66
TP20293 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
TP20293 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TP20293 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TP20293 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
TP20293 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TP20293 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TP20293 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.93□□□□□ -0.66
TP20293 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.93□□□□□ -0.66
TP20293 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.93□□□□□ -0.66
TP20293 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
TP20293 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TP20293 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
TP20293 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
TP20293 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TP20293 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
TP20293 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
TP20293 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.93□□□□□ -0.66
TP20293 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.92□□□□□ -0.66
TP20293 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.92□□□□□ -0.66
TP20293 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
TP20293 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
TP20293 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
TP20293 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.92□□□□□ -0.66
TP20293 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TP20293 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
TP20293 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TP20293 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TP20293 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TP20293 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.92□□□□□ -0.66
TP20293 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
TP20293 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TP20293 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TP20293 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.92□□□□□ -0.66
TP20293 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.92□□□□□ -0.66
TP20293 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
TP20293 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
TP20293 Gm23596-201ENSMUST00000104304 132 ntBASIC10.92□□□□□ -0.66
TP20293 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
TP20293 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TP20293 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TP20293 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TP20293 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.92□□□□□ -0.66
TP20293 Gm14277-201ENSMUST00000121195 360 ntBASIC10.92□□□□□ -0.66
TP20293 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TP20293 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.92□□□□□ -0.66
TP20293 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC10.92□□□□□ -0.66
TP20293 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.92□□□□□ -0.66
TP20293 Cd63-ps-202ENSMUST00000154992 717 ntBASIC10.92□□□□□ -0.66
TP20293 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TP20293 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TP20293 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TP20293 Gm27341-201ENSMUST00000183570 106 ntBASIC10.92□□□□□ -0.66
TP20293 Gm3332-201ENSMUST00000189337 928 ntBASIC10.92□□□□□ -0.66
TP20293 Gm4959-201ENSMUST00000197271 1044 ntBASIC10.92□□□□□ -0.66
TP20293 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TP20293 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TP20293 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TP20293 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TP20293 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.92□□□□□ -0.66
TP20293 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TP20293 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TP20293 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
TP20293 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TP20293 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TP20293 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
TP20293 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.92□□□□□ -0.66
TP20293 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TP20293 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TP20293 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TP20293 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TP20293 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
TP20293 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TP20293 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
TP20293 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TP20293 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TP20293 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TP20293 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.91□□□□□ -0.66
TP20293 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.91□□□□□ -0.66
TP20293 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TP20293 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
TP20293 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
TP20293 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.91□□□□□ -0.66
TP20293 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms