Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hmgn1P18608 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hmgn1P18608 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Hmgn1P18608 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Hmgn1P18608 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hmgn1P18608 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hmgn1P18608 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Hmgn1P18608 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hmgn1P18608 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Hmgn1P18608 Gm8752-201ENSMUST00000173427 1694 ntBASIC10.55□□□□□ -0.72
Hmgn1P18608 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hmgn1P18608 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hmgn1P18608 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hmgn1P18608 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.55□□□□□ -0.72
Hmgn1P18608 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.55□□□□□ -0.72
Hmgn1P18608 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Hmgn1P18608 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC10.55□□□□□ -0.72
Hmgn1P18608 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Hmgn1P18608 Gm8602-201ENSMUST00000184045 607 ntBASIC10.55□□□□□ -0.72
Hmgn1P18608 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.55□□□□□ -0.72
Hmgn1P18608 Gm37748-201ENSMUST00000194379 1140 ntBASIC10.55□□□□□ -0.72
Hmgn1P18608 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.55□□□□□ -0.72
Hmgn1P18608 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hmgn1P18608 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hmgn1P18608 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hmgn1P18608 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hmgn1P18608 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hmgn1P18608 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hmgn1P18608 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hmgn1P18608 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hmgn1P18608 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Hmgn1P18608 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hmgn1P18608 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hmgn1P18608 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.55□□□□□ -0.72
Hmgn1P18608 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hmgn1P18608 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hmgn1P18608 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hmgn1P18608 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC10.55□□□□□ -0.72
Hmgn1P18608 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Hmgn1P18608 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Hmgn1P18608 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hmgn1P18608 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hmgn1P18608 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Hmgn1P18608 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hmgn1P18608 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hmgn1P18608 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hmgn1P18608 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hmgn1P18608 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hmgn1P18608 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hmgn1P18608 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hmgn1P18608 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hmgn1P18608 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.54□□□□□ -0.72
Hmgn1P18608 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.54□□□□□ -0.72
Hmgn1P18608 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hmgn1P18608 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Hmgn1P18608 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hmgn1P18608 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hmgn1P18608 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hmgn1P18608 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hmgn1P18608 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hmgn1P18608 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Hmgn1P18608 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Hmgn1P18608 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hmgn1P18608 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hmgn1P18608 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Hmgn1P18608 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hmgn1P18608 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Hmgn1P18608 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Hmgn1P18608 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.54□□□□□ -0.72
Hmgn1P18608 Gm13786-201ENSMUST00000122371 333 ntBASIC10.54□□□□□ -0.72
Hmgn1P18608 Gm6963-201ENSMUST00000147879 379 ntBASIC10.54□□□□□ -0.72
Hmgn1P18608 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC10.54□□□□□ -0.72
Hmgn1P18608 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hmgn1P18608 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC10.54□□□□□ -0.72
Hmgn1P18608 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hmgn1P18608 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.54□□□□□ -0.72
Hmgn1P18608 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC10.54□□□□□ -0.72
Hmgn1P18608 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Hmgn1P18608 Gm5070-201ENSMUST00000177599 862 ntBASIC10.54□□□□□ -0.72
Hmgn1P18608 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.54□□□□□ -0.72
Hmgn1P18608 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.54□□□□□ -0.72
Hmgn1P18608 Gm3096-201ENSMUST00000185770 364 ntBASIC10.54□□□□□ -0.72
Hmgn1P18608 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.54□□□□□ -0.72
Hmgn1P18608 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.54□□□□□ -0.72
Hmgn1P18608 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hmgn1P18608 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hmgn1P18608 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hmgn1P18608 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.54□□□□□ -0.72
Hmgn1P18608 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.54□□□□□ -0.72
Hmgn1P18608 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hmgn1P18608 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hmgn1P18608 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hmgn1P18608 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hmgn1P18608 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hmgn1P18608 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Hmgn1P18608 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Hmgn1P18608 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.54□□□□□ -0.72
Hmgn1P18608 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.54□□□□□ -0.72
Hmgn1P18608 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hmgn1P18608 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms