Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxb3P09026 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxb3P09026 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.78□□□□□ -0.52
Hoxb3P09026 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.78□□□□□ -0.52
Hoxb3P09026 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.78□□□□□ -0.52
Hoxb3P09026 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxb3P09026 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxb3P09026 Gm7171-201ENSMUST00000177413 1349 ntBASIC11.78□□□□□ -0.52
Hoxb3P09026 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxb3P09026 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxb3P09026 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxb3P09026 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Hoxb3P09026 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.78□□□□□ -0.52
Hoxb3P09026 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxb3P09026 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxb3P09026 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxb3P09026 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxb3P09026 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Hoxb3P09026 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Hoxb3P09026 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxb3P09026 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hoxb3P09026 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.77□□□□□ -0.52
Hoxb3P09026 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hoxb3P09026 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Hoxb3P09026 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hoxb3P09026 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hoxb3P09026 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hoxb3P09026 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.77□□□□□ -0.52
Hoxb3P09026 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hoxb3P09026 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
Hoxb3P09026 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxb3P09026 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxb3P09026 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Hoxb3P09026 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Hoxb3P09026 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxb3P09026 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Hoxb3P09026 Ifna13-201ENSMUST00000105149 819 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Hoxb3P09026 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.77□□□□□ -0.53
Hoxb3P09026 Gm9506-201ENSMUST00000118516 320 ntBASIC11.77□□□□□ -0.53
Hoxb3P09026 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxb3P09026 Gm14905-201ENSMUST00000122351 639 ntBASIC11.77□□□□□ -0.53
Hoxb3P09026 Gm11588-201ENSMUST00000141758 658 ntTSL 5 BASIC11.77□□□□□ -0.53
Hoxb3P09026 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.77□□□□□ -0.53
Hoxb3P09026 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.77□□□□□ -0.53
Hoxb3P09026 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxb3P09026 Gm16167-201ENSMUST00000160428 1065 ntBASIC11.77□□□□□ -0.53
Hoxb3P09026 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.77□□□□□ -0.53
Hoxb3P09026 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC11.77□□□□□ -0.53
Hoxb3P09026 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxb3P09026 Mir7088-201ENSMUST00000184227 86 ntBASIC11.77□□□□□ -0.53
Hoxb3P09026 Ptma-202ENSMUST00000186255 768 ntTSL 2 BASIC11.77□□□□□ -0.53
Hoxb3P09026 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxb3P09026 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.77□□□□□ -0.53
Hoxb3P09026 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.77□□□□□ -0.53
Hoxb3P09026 Gm33707-201ENSMUST00000195135 569 ntBASIC11.77□□□□□ -0.53
Hoxb3P09026 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Hoxb3P09026 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC11.77□□□□□ -0.53
Hoxb3P09026 Gm45085-201ENSMUST00000209100 441 ntBASIC11.77□□□□□ -0.53
Hoxb3P09026 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.77□□□□□ -0.53
Hoxb3P09026 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxb3P09026 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxb3P09026 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxb3P09026 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Hoxb3P09026 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxb3P09026 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxb3P09026 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxb3P09026 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.77□□□□□ -0.53
Hoxb3P09026 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Hoxb3P09026 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxb3P09026 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.77□□□□□ -0.53
Hoxb3P09026 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.77□□□□□ -0.53
Hoxb3P09026 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxb3P09026 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxb3P09026 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxb3P09026 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxb3P09026 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Hoxb3P09026 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxb3P09026 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxb3P09026 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxb3P09026 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC11.76□□□□□ -0.53
Hoxb3P09026 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxb3P09026 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxb3P09026 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxb3P09026 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxb3P09026 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxb3P09026 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxb3P09026 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxb3P09026 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxb3P09026 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Hoxb3P09026 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Hoxb3P09026 Gm12072-201ENSMUST00000118293 715 ntBASIC11.76□□□□□ -0.53
Hoxb3P09026 Gm11835-201ENSMUST00000120635 663 ntBASIC11.76□□□□□ -0.53
Hoxb3P09026 Gm15595-201ENSMUST00000120840 961 ntBASIC11.76□□□□□ -0.53
Hoxb3P09026 Gm16459-201ENSMUST00000121443 686 ntBASIC11.76□□□□□ -0.53
Hoxb3P09026 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxb3P09026 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxb3P09026 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxb3P09026 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Hoxb3P09026 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxb3P09026 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms