Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TnfP06804 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TnfP06804 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
TnfP06804 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TnfP06804 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TnfP06804 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
TnfP06804 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TnfP06804 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TnfP06804 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TnfP06804 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TnfP06804 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
TnfP06804 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TnfP06804 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TnfP06804 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
TnfP06804 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
TnfP06804 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
TnfP06804 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
TnfP06804 Gm14395-201ENSMUST00000120494 563 ntBASIC12.25□□□□□ -0.45
TnfP06804 n-R5s84-201ENSMUST00000122591 109 ntBASIC12.25□□□□□ -0.45
TnfP06804 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.25□□□□□ -0.45
TnfP06804 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TnfP06804 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.25□□□□□ -0.45
TnfP06804 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TnfP06804 Gm25492-201ENSMUST00000157383 129 ntBASIC12.25□□□□□ -0.45
TnfP06804 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
TnfP06804 Gm8531-201ENSMUST00000188319 893 ntBASIC12.25□□□□□ -0.45
TnfP06804 Gm42518-201ENSMUST00000196277 938 ntBASIC12.25□□□□□ -0.45
TnfP06804 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.25□□□□□ -0.45
TnfP06804 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TnfP06804 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
TnfP06804 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TnfP06804 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TnfP06804 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
TnfP06804 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TnfP06804 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TnfP06804 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TnfP06804 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TnfP06804 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TnfP06804 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TnfP06804 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
TnfP06804 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.25□□□□□ -0.45
TnfP06804 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.25□□□□□ -0.45
TnfP06804 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TnfP06804 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TnfP06804 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TnfP06804 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TnfP06804 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TnfP06804 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
TnfP06804 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
TnfP06804 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TnfP06804 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
TnfP06804 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
TnfP06804 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TnfP06804 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
TnfP06804 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TnfP06804 Gm25766-201ENSMUST00000104101 131 ntBASIC12.24□□□□□ -0.45
TnfP06804 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
TnfP06804 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12.24□□□□□ -0.45
TnfP06804 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TnfP06804 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TnfP06804 Gm16219-201ENSMUST00000120096 274 ntBASIC12.24□□□□□ -0.45
TnfP06804 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
TnfP06804 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.24□□□□□ -0.45
TnfP06804 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TnfP06804 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC12.24□□□□□ -0.45
TnfP06804 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
TnfP06804 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TnfP06804 Gm25072-201ENSMUST00000175233 235 ntBASIC12.24□□□□□ -0.45
TnfP06804 Gm23153-201ENSMUST00000175323 313 ntBASIC12.24□□□□□ -0.45
TnfP06804 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TnfP06804 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TnfP06804 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TnfP06804 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TnfP06804 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
TnfP06804 Gm37284-201ENSMUST00000193607 539 ntBASIC12.24□□□□□ -0.45
TnfP06804 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
TnfP06804 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.24□□□□□ -0.45
TnfP06804 Gm44008-201ENSMUST00000204345 412 ntBASIC12.24□□□□□ -0.45
TnfP06804 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.24□□□□□ -0.45
TnfP06804 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TnfP06804 CT025553.1-201ENSMUST00000226292 299 ntBASIC12.24□□□□□ -0.45
TnfP06804 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TnfP06804 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TnfP06804 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
TnfP06804 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TnfP06804 Gm23680-201ENSMUST00000083162 164 ntBASIC12.24□□□□□ -0.45
TnfP06804 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
TnfP06804 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TnfP06804 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TnfP06804 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TnfP06804 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TnfP06804 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TnfP06804 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.24□□□□□ -0.45
TnfP06804 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
TnfP06804 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TnfP06804 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TnfP06804 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.24□□□□□ -0.45
TnfP06804 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
TnfP06804 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
TnfP06804 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms