Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CopeO89079 Gm5705-201ENSMUST00000066241 711 ntBASIC11.89□□□□□ -0.51
CopeO89079 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
CopeO89079 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CopeO89079 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CopeO89079 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
CopeO89079 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.89□□□□□ -0.51
CopeO89079 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.89□□□□□ -0.51
CopeO89079 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CopeO89079 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
CopeO89079 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CopeO89079 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
CopeO89079 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CopeO89079 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CopeO89079 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CopeO89079 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CopeO89079 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CopeO89079 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CopeO89079 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CopeO89079 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.88□□□□□ -0.51
CopeO89079 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
CopeO89079 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CopeO89079 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CopeO89079 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CopeO89079 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CopeO89079 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CopeO89079 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CopeO89079 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CopeO89079 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CopeO89079 Gm11930-201ENSMUST00000117788 190 ntBASIC11.88□□□□□ -0.51
CopeO89079 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.88□□□□□ -0.51
CopeO89079 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CopeO89079 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
CopeO89079 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CopeO89079 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CopeO89079 Gm31256-201ENSMUST00000194705 506 ntBASIC11.88□□□□□ -0.51
CopeO89079 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
CopeO89079 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
CopeO89079 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CopeO89079 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CopeO89079 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
CopeO89079 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
CopeO89079 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CopeO89079 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CopeO89079 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.88□□□□□ -0.51
CopeO89079 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CopeO89079 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CopeO89079 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CopeO89079 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CopeO89079 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CopeO89079 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CopeO89079 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.88□□□□□ -0.51
CopeO89079 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CopeO89079 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CopeO89079 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CopeO89079 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CopeO89079 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CopeO89079 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CopeO89079 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CopeO89079 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CopeO89079 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopeO89079 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopeO89079 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.87□□□□□ -0.51
CopeO89079 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopeO89079 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopeO89079 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CopeO89079 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CopeO89079 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopeO89079 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopeO89079 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopeO89079 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CopeO89079 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.87□□□□□ -0.51
CopeO89079 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CopeO89079 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.87□□□□□ -0.51
CopeO89079 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopeO89079 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopeO89079 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
CopeO89079 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CopeO89079 Gm27046-201ENSMUST00000182160 463 ntBASIC11.87□□□□□ -0.51
CopeO89079 Mir8093-201ENSMUST00000185043 137 ntBASIC11.87□□□□□ -0.51
CopeO89079 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.87□□□□□ -0.51
CopeO89079 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.87□□□□□ -0.51
CopeO89079 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopeO89079 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.87□□□□□ -0.51
CopeO89079 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CopeO89079 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopeO89079 Gm9823-201ENSMUST00000051212 327 ntBASIC11.87□□□□□ -0.51
CopeO89079 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopeO89079 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CopeO89079 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopeO89079 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CopeO89079 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopeO89079 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.87□□□□□ -0.51
CopeO89079 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopeO89079 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CopeO89079 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CopeO89079 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopeO89079 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
CopeO89079 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopeO89079 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms