Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pdlim1O70400 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pdlim1O70400 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pdlim1O70400 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pdlim1O70400 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Pdlim1O70400 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim1O70400 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim1O70400 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim1O70400 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim1O70400 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim1O70400 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim1O70400 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.47□□□□□ -0.57
Pdlim1O70400 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim1O70400 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim1O70400 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim1O70400 Gm15352-201ENSMUST00000118696 270 ntBASIC11.47□□□□□ -0.57
Pdlim1O70400 Gm7150-201ENSMUST00000122032 981 ntBASIC11.47□□□□□ -0.57
Pdlim1O70400 B9d1os-201ENSMUST00000137010 674 ntBASIC11.47□□□□□ -0.57
Pdlim1O70400 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.47□□□□□ -0.57
Pdlim1O70400 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.47□□□□□ -0.57
Pdlim1O70400 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.47□□□□□ -0.57
Pdlim1O70400 Gm43852-201ENSMUST00000202098 917 ntBASIC11.47□□□□□ -0.57
Pdlim1O70400 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Pdlim1O70400 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.47□□□□□ -0.57
Pdlim1O70400 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim1O70400 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.47□□□□□ -0.57
Pdlim1O70400 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.47□□□□□ -0.57
Pdlim1O70400 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Pdlim1O70400 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim1O70400 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim1O70400 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim1O70400 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Pdlim1O70400 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC11.47□□□□□ -0.57
Pdlim1O70400 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.47□□□□□ -0.57
Pdlim1O70400 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim1O70400 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.47□□□□□ -0.57
Pdlim1O70400 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim1O70400 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim1O70400 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim1O70400 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim1O70400 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim1O70400 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim1O70400 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Pdlim1O70400 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdlim1O70400 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.46□□□□□ -0.57
Pdlim1O70400 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.46□□□□□ -0.57
Pdlim1O70400 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdlim1O70400 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdlim1O70400 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.46□□□□□ -0.57
Pdlim1O70400 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.46□□□□□ -0.57
Pdlim1O70400 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pdlim1O70400 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdlim1O70400 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdlim1O70400 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.46□□□□□ -0.57
Pdlim1O70400 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pdlim1O70400 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Pdlim1O70400 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdlim1O70400 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.46□□□□□ -0.57
Pdlim1O70400 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdlim1O70400 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdlim1O70400 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdlim1O70400 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Pdlim1O70400 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pdlim1O70400 Gm3329-201ENSMUST00000159873 556 ntBASIC11.46□□□□□ -0.57
Pdlim1O70400 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.46□□□□□ -0.57
Pdlim1O70400 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdlim1O70400 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.46□□□□□ -0.57
Pdlim1O70400 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pdlim1O70400 Gm43138-201ENSMUST00000199123 708 ntBASIC11.46□□□□□ -0.57
Pdlim1O70400 Mir7686-201ENSMUST00000200604 57 ntBASIC11.46□□□□□ -0.57
Pdlim1O70400 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pdlim1O70400 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.46□□□□□ -0.57
Pdlim1O70400 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Pdlim1O70400 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Pdlim1O70400 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.46□□□□□ -0.57
Pdlim1O70400 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pdlim1O70400 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pdlim1O70400 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pdlim1O70400 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pdlim1O70400 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pdlim1O70400 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pdlim1O70400 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pdlim1O70400 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pdlim1O70400 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pdlim1O70400 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim1O70400 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim1O70400 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim1O70400 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim1O70400 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Pdlim1O70400 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim1O70400 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim1O70400 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim1O70400 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.45□□□□□ -0.58
Pdlim1O70400 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.45□□□□□ -0.58
Pdlim1O70400 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim1O70400 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim1O70400 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim1O70400 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.45□□□□□ -0.58
Pdlim1O70400 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim1O70400 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms