Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Gm8531-201ENSMUST00000188319 893 ntBASIC9.78□□□□□ -0.84
Cxcl13O55038 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC9.78□□□□□ -0.84
Cxcl13O55038 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC9.78□□□□□ -0.84
Cxcl13O55038 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC9.78□□□□□ -0.84
Cxcl13O55038 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC9.78□□□□□ -0.84
Cxcl13O55038 Gm44158-201ENSMUST00000203881 505 ntBASIC9.78□□□□□ -0.84
Cxcl13O55038 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC9.78□□□□□ -0.84
Cxcl13O55038 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC9.78□□□□□ -0.84
Cxcl13O55038 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC9.78□□□□□ -0.84
Cxcl13O55038 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC9.78□□□□□ -0.84
Cxcl13O55038 CT009536.2-201ENSMUST00000225370 665 ntBASIC9.78□□□□□ -0.84
Cxcl13O55038 AC102368.1-201ENSMUST00000227161 892 ntBASIC9.78□□□□□ -0.84
Cxcl13O55038 Gm5468-202ENSMUST00000227851 682 ntBASIC9.78□□□□□ -0.84
Cxcl13O55038 AC136376.2-201ENSMUST00000228819 490 ntBASIC9.78□□□□□ -0.84
Cxcl13O55038 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cxcl13O55038 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cxcl13O55038 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cxcl13O55038 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cxcl13O55038 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cxcl13O55038 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cxcl13O55038 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cxcl13O55038 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cxcl13O55038 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Cxcl13O55038 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cxcl13O55038 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cxcl13O55038 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cxcl13O55038 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cxcl13O55038 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cxcl13O55038 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cxcl13O55038 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
Cxcl13O55038 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Cxcl13O55038 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC9.77□□□□□ -0.84
Cxcl13O55038 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC9.77□□□□□ -0.84
Cxcl13O55038 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cxcl13O55038 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
Cxcl13O55038 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cxcl13O55038 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cxcl13O55038 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC9.77□□□□□ -0.84
Cxcl13O55038 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cxcl13O55038 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cxcl13O55038 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Cxcl13O55038 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cxcl13O55038 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cxcl13O55038 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC9.77□□□□□ -0.85
Cxcl13O55038 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Cxcl13O55038 Gm38273-201ENSMUST00000194987 2382 ntBASIC9.77□□□□□ -0.85
Cxcl13O55038 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Cxcl13O55038 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC9.77□□□□□ -0.85
Cxcl13O55038 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cxcl13O55038 Gm16219-201ENSMUST00000120096 274 ntBASIC9.77□□□□□ -0.85
Cxcl13O55038 Gm14395-201ENSMUST00000120494 563 ntBASIC9.77□□□□□ -0.85
Cxcl13O55038 n-R5s84-201ENSMUST00000122591 109 ntBASIC9.77□□□□□ -0.85
Cxcl13O55038 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC9.77□□□□□ -0.85
Cxcl13O55038 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cxcl13O55038 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Cxcl13O55038 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cxcl13O55038 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Cxcl13O55038 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Cxcl13O55038 Gm8492-201ENSMUST00000182375 987 ntBASIC9.77□□□□□ -0.85
Cxcl13O55038 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC9.77□□□□□ -0.85
Cxcl13O55038 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Cxcl13O55038 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Cxcl13O55038 Gm37284-201ENSMUST00000193607 539 ntBASIC9.77□□□□□ -0.85
Cxcl13O55038 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC9.77□□□□□ -0.85
Cxcl13O55038 Gm45594-201ENSMUST00000211717 241 ntBASIC9.77□□□□□ -0.85
Cxcl13O55038 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC9.77□□□□□ -0.85
Cxcl13O55038 Gm6722-201ENSMUST00000221586 390 ntBASIC9.77□□□□□ -0.85
Cxcl13O55038 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Cxcl13O55038 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cxcl13O55038 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Cxcl13O55038 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC9.77□□□□□ -0.85
Cxcl13O55038 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC9.77□□□□□ -0.85
Cxcl13O55038 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC9.77□□□□□ -0.85
Cxcl13O55038 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cxcl13O55038 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cxcl13O55038 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cxcl13O55038 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cxcl13O55038 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cxcl13O55038 Gm43075-201ENSMUST00000198613 3905 ntBASIC9.77□□□□□ -0.85
Cxcl13O55038 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC9.77□□□□□ -0.85
Cxcl13O55038 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cxcl13O55038 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cxcl13O55038 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cxcl13O55038 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cxcl13O55038 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cxcl13O55038 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cxcl13O55038 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Cxcl13O55038 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Cxcl13O55038 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Cxcl13O55038 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Cxcl13O55038 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cxcl13O55038 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cxcl13O55038 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cxcl13O55038 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC9.76□□□□□ -0.85
Cxcl13O55038 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cxcl13O55038 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cxcl13O55038 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC9.76□□□□□ -0.85
Cxcl13O55038 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cxcl13O55038 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC9.76□□□□□ -0.85
Cxcl13O55038 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms