Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rnf13O54965 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Rnf13O54965 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.46□□□□□ -0.73
Rnf13O54965 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.46□□□□□ -0.73
Rnf13O54965 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rnf13O54965 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.46□□□□□ -0.73
Rnf13O54965 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.46□□□□□ -0.73
Rnf13O54965 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rnf13O54965 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
Rnf13O54965 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rnf13O54965 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Rnf13O54965 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rnf13O54965 Gm11511-201ENSMUST00000118146 540 ntBASIC10.46□□□□□ -0.73
Rnf13O54965 Gm15004-201ENSMUST00000119192 630 ntBASIC10.46□□□□□ -0.73
Rnf13O54965 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Rnf13O54965 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.46□□□□□ -0.73
Rnf13O54965 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.46□□□□□ -0.73
Rnf13O54965 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rnf13O54965 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
Rnf13O54965 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC10.46□□□□□ -0.73
Rnf13O54965 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rnf13O54965 Olfr284-202ENSMUST00000206647 966 ntBASIC10.46□□□□□ -0.73
Rnf13O54965 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC10.46□□□□□ -0.73
Rnf13O54965 AC166349.1-201ENSMUST00000220866 695 ntBASIC10.46□□□□□ -0.73
Rnf13O54965 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rnf13O54965 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rnf13O54965 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rnf13O54965 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Rnf13O54965 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.46□□□□□ -0.74
Rnf13O54965 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.46□□□□□ -0.74
Rnf13O54965 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.46□□□□□ -0.74
Rnf13O54965 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rnf13O54965 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Rnf13O54965 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Rnf13O54965 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Rnf13O54965 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rnf13O54965 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rnf13O54965 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rnf13O54965 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Rnf13O54965 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Rnf13O54965 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Rnf13O54965 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rnf13O54965 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Rnf13O54965 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.74
Rnf13O54965 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf13O54965 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf13O54965 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf13O54965 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf13O54965 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf13O54965 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf13O54965 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf13O54965 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.45□□□□□ -0.74
Rnf13O54965 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf13O54965 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Rnf13O54965 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf13O54965 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf13O54965 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf13O54965 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf13O54965 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf13O54965 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.45□□□□□ -0.74
Rnf13O54965 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf13O54965 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf13O54965 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf13O54965 Gm8062-201ENSMUST00000139696 444 ntBASIC10.45□□□□□ -0.74
Rnf13O54965 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC10.45□□□□□ -0.74
Rnf13O54965 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf13O54965 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf13O54965 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf13O54965 Gm3096-201ENSMUST00000185770 364 ntBASIC10.45□□□□□ -0.74
Rnf13O54965 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf13O54965 Gm18935-201ENSMUST00000212692 664 ntBASIC10.45□□□□□ -0.74
Rnf13O54965 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.45□□□□□ -0.74
Rnf13O54965 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf13O54965 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf13O54965 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf13O54965 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf13O54965 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf13O54965 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf13O54965 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Rnf13O54965 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf13O54965 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf13O54965 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.45□□□□□ -0.74
Rnf13O54965 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf13O54965 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf13O54965 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf13O54965 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf13O54965 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf13O54965 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rnf13O54965 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Rnf13O54965 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Rnf13O54965 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rnf13O54965 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rnf13O54965 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Rnf13O54965 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rnf13O54965 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rnf13O54965 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Rnf13O54965 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rnf13O54965 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Rnf13O54965 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.44□□□□□ -0.74
Rnf13O54965 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms