Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tcof1O08784 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tcof1O08784 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tcof1O08784 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tcof1O08784 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tcof1O08784 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tcof1O08784 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tcof1O08784 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tcof1O08784 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tcof1O08784 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tcof1O08784 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.53□□□□□ -0.24
Tcof1O08784 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tcof1O08784 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tcof1O08784 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tcof1O08784 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tcof1O08784 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tcof1O08784 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Tcof1O08784 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tcof1O08784 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC13.53□□□□□ -0.24
Tcof1O08784 Gm37299-201ENSMUST00000193951 826 ntBASIC13.53□□□□□ -0.24
Tcof1O08784 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC13.53□□□□□ -0.24
Tcof1O08784 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tcof1O08784 AC153505.1-201ENSMUST00000218819 1071 ntBASIC13.53□□□□□ -0.24
Tcof1O08784 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tcof1O08784 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tcof1O08784 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Tcof1O08784 Snora73b-201ENSMUST00000083419 205 ntBASIC13.53□□□□□ -0.24
Tcof1O08784 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tcof1O08784 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tcof1O08784 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tcof1O08784 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tcof1O08784 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Tcof1O08784 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tcof1O08784 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Tcof1O08784 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tcof1O08784 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tcof1O08784 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Tcof1O08784 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Tcof1O08784 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC13.53□□□□□ -0.24
Tcof1O08784 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tcof1O08784 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.52□□□□□ -0.24
Tcof1O08784 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tcof1O08784 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tcof1O08784 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Tcof1O08784 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tcof1O08784 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Tcof1O08784 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tcof1O08784 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tcof1O08784 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tcof1O08784 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Tcof1O08784 Gm11500-201ENSMUST00000118237 601 ntBASIC13.52□□□□□ -0.25
Tcof1O08784 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tcof1O08784 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tcof1O08784 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tcof1O08784 Gm26047-201ENSMUST00000157308 113 ntBASIC13.52□□□□□ -0.25
Tcof1O08784 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tcof1O08784 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Tcof1O08784 Gm43520-201ENSMUST00000197996 164 ntBASIC13.52□□□□□ -0.25
Tcof1O08784 Gm26047-202ENSMUST00000198840 115 ntBASIC13.52□□□□□ -0.25
Tcof1O08784 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tcof1O08784 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Tcof1O08784 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tcof1O08784 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tcof1O08784 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tcof1O08784 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.52□□□□□ -0.25
Tcof1O08784 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tcof1O08784 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tcof1O08784 Gm18642-201ENSMUST00000206642 1400 ntBASIC13.52□□□□□ -0.25
Tcof1O08784 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tcof1O08784 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC13.52□□□□□ -0.25
Tcof1O08784 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tcof1O08784 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tcof1O08784 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tcof1O08784 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tcof1O08784 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tcof1O08784 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.51□□□□□ -0.25
Tcof1O08784 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tcof1O08784 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tcof1O08784 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Tcof1O08784 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tcof1O08784 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tcof1O08784 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tcof1O08784 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tcof1O08784 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tcof1O08784 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC13.51□□□□□ -0.25
Tcof1O08784 Gm11246-201ENSMUST00000120880 345 ntBASIC13.51□□□□□ -0.25
Tcof1O08784 Gm11244-201ENSMUST00000121243 237 ntBASIC13.51□□□□□ -0.25
Tcof1O08784 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC13.51□□□□□ -0.25
Tcof1O08784 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC13.51□□□□□ -0.25
Tcof1O08784 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Tcof1O08784 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tcof1O08784 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tcof1O08784 Gm37981-201ENSMUST00000194280 535 ntBASIC13.51□□□□□ -0.25
Tcof1O08784 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC13.51□□□□□ -0.25
Tcof1O08784 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC13.51□□□□□ -0.25
Tcof1O08784 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Tcof1O08784 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC13.51□□□□□ -0.25
Tcof1O08784 AC132901.1-201ENSMUST00000224345 508 ntBASIC13.51□□□□□ -0.25
Tcof1O08784 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Tcof1O08784 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms