Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Gm27627-201ENSMUST00000183644 150 ntBASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Gm44262-201ENSMUST00000204969 372 ntBASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Pcdh9F8VPK8 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Pcdh9F8VPK8 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Pcdh9F8VPK8 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Mir877-201ENSMUST00000104738 85 ntBASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Gm13996-201ENSMUST00000118456 430 ntBASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Gm15207-201ENSMUST00000119259 442 ntBASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Gm26047-201ENSMUST00000157308 113 ntBASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Gm26047-202ENSMUST00000198840 115 ntBASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Gm8913-201ENSMUST00000209491 641 ntBASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Btrc-209ENSMUST00000224478 2194 ntBASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh9F8VPK8 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms