Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Gm26956-201ENSMUST00000182176 986 ntBASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Olfr284-202ENSMUST00000206647 966 ntBASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Gm5455-201ENSMUST00000058710 715 ntBASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.42□□□□□ -0.74
Pcdh1F7BJK1 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 AC123738.2-201ENSMUST00000223791 1899 ntBASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Gm12241-201ENSMUST00000118330 726 ntBASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Pcdh1F7BJK1 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pcdh1F7BJK1 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pcdh1F7BJK1 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pcdh1F7BJK1 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pcdh1F7BJK1 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pcdh1F7BJK1 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pcdh1F7BJK1 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pcdh1F7BJK1 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pcdh1F7BJK1 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms