Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Hfm1D3Z4R1 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Hfm1D3Z4R1 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Hfm1D3Z4R1 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Hfm1D3Z4R1 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hfm1D3Z4R1 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hfm1D3Z4R1 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC16.02■□□□□ 0.15
Hfm1D3Z4R1 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hfm1D3Z4R1 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hfm1D3Z4R1 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Hfm1D3Z4R1 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Hfm1D3Z4R1 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.15
Hfm1D3Z4R1 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hfm1D3Z4R1 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hfm1D3Z4R1 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Hfm1D3Z4R1 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Hfm1D3Z4R1 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hfm1D3Z4R1 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Hfm1D3Z4R1 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hfm1D3Z4R1 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hfm1D3Z4R1 Gm7765-201ENSMUST00000182585 974 ntBASIC16.02■□□□□ 0.15
Hfm1D3Z4R1 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC16.02■□□□□ 0.15
Hfm1D3Z4R1 Gm43966-201ENSMUST00000203301 612 ntBASIC16.02■□□□□ 0.15
Hfm1D3Z4R1 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC16.02■□□□□ 0.15
Hfm1D3Z4R1 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC16.02■□□□□ 0.15
Hfm1D3Z4R1 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Hfm1D3Z4R1 AC159196.1-201ENSMUST00000225524 377 ntBASIC16.02■□□□□ 0.15
Hfm1D3Z4R1 Nsmce2-203ENSMUST00000227173 1122 ntBASIC16.02■□□□□ 0.15
Hfm1D3Z4R1 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hfm1D3Z4R1 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC16.02■□□□□ 0.15
Hfm1D3Z4R1 Gm10020-201ENSMUST00000081993 612 ntBASIC16.02■□□□□ 0.15
Hfm1D3Z4R1 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hfm1D3Z4R1 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Hfm1D3Z4R1 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hfm1D3Z4R1 Gm5822-201ENSMUST00000161562 1378 ntBASIC16.01■□□□□ 0.15
Hfm1D3Z4R1 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hfm1D3Z4R1 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hfm1D3Z4R1 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hfm1D3Z4R1 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hfm1D3Z4R1 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hfm1D3Z4R1 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hfm1D3Z4R1 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Hfm1D3Z4R1 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hfm1D3Z4R1 Gm6157-201ENSMUST00000199935 1897 ntBASIC16.01■□□□□ 0.15
Hfm1D3Z4R1 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Hfm1D3Z4R1 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hfm1D3Z4R1 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC16.01■□□□□ 0.15
Hfm1D3Z4R1 Gm16209-201ENSMUST00000118457 627 ntBASIC16.01■□□□□ 0.15
Hfm1D3Z4R1 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hfm1D3Z4R1 Gm10171-201ENSMUST00000126220 628 ntBASIC16.01■□□□□ 0.15
Hfm1D3Z4R1 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Hfm1D3Z4R1 Gm7445-201ENSMUST00000192115 340 ntBASIC16.01■□□□□ 0.15
Hfm1D3Z4R1 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Hfm1D3Z4R1 Wbp1-209ENSMUST00000205023 716 ntBASIC16.01■□□□□ 0.15
Hfm1D3Z4R1 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC16.01■□□□□ 0.15
Hfm1D3Z4R1 Gm10233-201ENSMUST00000089275 628 ntBASIC16.01■□□□□ 0.15
Hfm1D3Z4R1 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Hfm1D3Z4R1 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Hfm1D3Z4R1 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hfm1D3Z4R1 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Hfm1D3Z4R1 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hfm1D3Z4R1 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hfm1D3Z4R1 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hfm1D3Z4R1 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Hfm1D3Z4R1 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC16■□□□□ 0.15
Hfm1D3Z4R1 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hfm1D3Z4R1 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC16■□□□□ 0.15
Hfm1D3Z4R1 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Hfm1D3Z4R1 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Hfm1D3Z4R1 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC16■□□□□ 0.15
Hfm1D3Z4R1 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC16■□□□□ 0.15
Hfm1D3Z4R1 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
Hfm1D3Z4R1 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hfm1D3Z4R1 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hfm1D3Z4R1 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hfm1D3Z4R1 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Hfm1D3Z4R1 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC16■□□□□ 0.15
Hfm1D3Z4R1 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hfm1D3Z4R1 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Hfm1D3Z4R1 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Hfm1D3Z4R1 Gm25288-201ENSMUST00000122800 265 ntBASIC16■□□□□ 0.15
Hfm1D3Z4R1 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC16■□□□□ 0.15
Hfm1D3Z4R1 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC16■□□□□ 0.15
Hfm1D3Z4R1 Gm37851-201ENSMUST00000193871 889 ntBASIC16■□□□□ 0.15
Hfm1D3Z4R1 Gm43460-201ENSMUST00000202491 1057 ntBASIC16■□□□□ 0.15
Hfm1D3Z4R1 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC16■□□□□ 0.15
Hfm1D3Z4R1 Gm9644-201ENSMUST00000212828 1183 ntBASIC16■□□□□ 0.15
Hfm1D3Z4R1 AC107752.1-201ENSMUST00000219362 469 ntBASIC16■□□□□ 0.15
Hfm1D3Z4R1 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hfm1D3Z4R1 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Hfm1D3Z4R1 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC16■□□□□ 0.15
Hfm1D3Z4R1 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Hfm1D3Z4R1 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC16■□□□□ 0.15
Hfm1D3Z4R1 Gm45416-201ENSMUST00000209713 2201 ntBASIC16■□□□□ 0.15
Hfm1D3Z4R1 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hfm1D3Z4R1 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hfm1D3Z4R1 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hfm1D3Z4R1 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC16■□□□□ 0.15
Hfm1D3Z4R1 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Hfm1D3Z4R1 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms