Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Gm4978-201ENSMUST00000071565 801 ntBASIC10.39□□□□□ -0.75
Shank1D3YZU1 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Ntrk2-208ENSMUST00000225583 2719 ntBASIC10.39□□□□□ -0.75
Shank1D3YZU1 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Shank1D3YZU1 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Shank1D3YZU1 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Shank1D3YZU1 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shank1D3YZU1 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shank1D3YZU1 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shank1D3YZU1 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Shank1D3YZU1 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Shank1D3YZU1 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shank1D3YZU1 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.38□□□□□ -0.75
Shank1D3YZU1 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shank1D3YZU1 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC10.38□□□□□ -0.75
Shank1D3YZU1 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Shank1D3YZU1 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shank1D3YZU1 CT010506.1-201ENSMUST00000223673 349 ntBASIC10.38□□□□□ -0.75
Shank1D3YZU1 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.38□□□□□ -0.75
Shank1D3YZU1 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shank1D3YZU1 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shank1D3YZU1 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shank1D3YZU1 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shank1D3YZU1 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shank1D3YZU1 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shank1D3YZU1 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Shank1D3YZU1 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Shank1D3YZU1 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shank1D3YZU1 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.38□□□□□ -0.75
Shank1D3YZU1 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shank1D3YZU1 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shank1D3YZU1 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.38□□□□□ -0.75
Shank1D3YZU1 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shank1D3YZU1 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shank1D3YZU1 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Shank1D3YZU1 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.38□□□□□ -0.75
Shank1D3YZU1 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shank1D3YZU1 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.38□□□□□ -0.75
Shank1D3YZU1 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC10.38□□□□□ -0.75
Shank1D3YZU1 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shank1D3YZU1 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Shank1D3YZU1 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC10.38□□□□□ -0.75
Shank1D3YZU1 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC10.38□□□□□ -0.75
Shank1D3YZU1 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.38□□□□□ -0.75
Shank1D3YZU1 Gm42430-201ENSMUST00000197209 616 ntBASIC10.38□□□□□ -0.75
Shank1D3YZU1 Gm43969-201ENSMUST00000204833 535 ntBASIC10.38□□□□□ -0.75
Shank1D3YZU1 Gm5996-201ENSMUST00000211110 718 ntBASIC10.38□□□□□ -0.75
Shank1D3YZU1 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shank1D3YZU1 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Shank1D3YZU1 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Shank1D3YZU1 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shank1D3YZU1 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Shank1D3YZU1 Map1b-203ENSMUST00000223725 2669 ntBASIC10.37□□□□□ -0.75
Shank1D3YZU1 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Shank1D3YZU1 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Shank1D3YZU1 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Shank1D3YZU1 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Shank1D3YZU1 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Shank1D3YZU1 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.37□□□□□ -0.75
Shank1D3YZU1 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Shank1D3YZU1 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.37□□□□□ -0.75
Shank1D3YZU1 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Shank1D3YZU1 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Shank1D3YZU1 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.37□□□□□ -0.75
Shank1D3YZU1 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Shank1D3YZU1 Gm12274-201ENSMUST00000120062 385 ntBASIC10.37□□□□□ -0.75
Shank1D3YZU1 Gm9166-201ENSMUST00000120293 561 ntBASIC10.37□□□□□ -0.75
Shank1D3YZU1 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Shank1D3YZU1 Gm21778-201ENSMUST00000178779 471 ntBASIC10.37□□□□□ -0.75
Shank1D3YZU1 AC158388.3-202ENSMUST00000225517 775 ntBASIC10.37□□□□□ -0.75
Shank1D3YZU1 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.37□□□□□ -0.75
Shank1D3YZU1 Gm5513-201ENSMUST00000072982 1218 ntBASIC10.37□□□□□ -0.75
Shank1D3YZU1 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Shank1D3YZU1 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC10.37□□□□□ -0.75
Shank1D3YZU1 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Shank1D3YZU1 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Shank1D3YZU1 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Shank1D3YZU1 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.37□□□□□ -0.75
Shank1D3YZU1 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Shank1D3YZU1 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Shank1D3YZU1 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Shank1D3YZU1 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Shank1D3YZU1 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Shank1D3YZU1 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Shank1D3YZU1 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Shank1D3YZU1 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC10.37□□□□□ -0.75
Shank1D3YZU1 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Shank1D3YZU1 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Shank1D3YZU1 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Shank1D3YZU1 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Gm5909-201ENSMUST00000119768 1281 ntBASIC10.36□□□□□ -0.75
Shank1D3YZU1 Gm15610-201ENSMUST00000120584 195 ntBASIC10.36□□□□□ -0.75
Shank1D3YZU1 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms