Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Usf3B2RUQ2 Gm12969-201ENSMUST00000120199 1004 ntBASIC9.7□□□□□ -0.86
Usf3B2RUQ2 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC9.7□□□□□ -0.86
Usf3B2RUQ2 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Usf3B2RUQ2 Gm23085-201ENSMUST00000157849 293 ntBASIC9.7□□□□□ -0.86
Usf3B2RUQ2 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
Usf3B2RUQ2 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Usf3B2RUQ2 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC9.7□□□□□ -0.86
Usf3B2RUQ2 Gm9463-201ENSMUST00000206707 601 ntBASIC9.7□□□□□ -0.86
Usf3B2RUQ2 Gm19640-201ENSMUST00000214849 464 ntBASIC9.7□□□□□ -0.86
Usf3B2RUQ2 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Usf3B2RUQ2 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Usf3B2RUQ2 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Usf3B2RUQ2 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Usf3B2RUQ2 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Gm23912-201ENSMUST00000104687 87 ntBASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Gm15573-201ENSMUST00000119487 540 ntBASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Gm6114-201ENSMUST00000182472 968 ntBASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Gm8343-201ENSMUST00000182705 994 ntBASIC9.69□□□□□ -0.86
Usf3B2RUQ2 AC126799.1-201ENSMUST00000221976 246 ntBASIC9.69□□□□□ -0.86
Usf3B2RUQ2 AC171241.1-201ENSMUST00000228144 1166 ntBASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Gm43242-201ENSMUST00000199507 1776 ntBASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Gm9129-201ENSMUST00000218173 1689 ntBASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usf3B2RUQ2 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Gm11511-201ENSMUST00000118146 540 ntBASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Gm8199-201ENSMUST00000121323 823 ntBASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Gm7278-201ENSMUST00000119836 1401 ntBASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Usf3B2RUQ2 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms