Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.81□□□□□ -0.52
Tubb1A2AQ07 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Tubb1A2AQ07 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb1A2AQ07 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Gm14724-201ENSMUST00000118400 537 ntBASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Tubb1A2AQ07 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Gm25881-201ENSMUST00000157783 103 ntBASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Gm8815-201ENSMUST00000173809 620 ntBASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Gm10807-201ENSMUST00000177134 795 ntBASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Gm6439-201ENSMUST00000199849 862 ntBASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.81□□□□□ -0.52
Tubb1A2AQ07 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Gm8385-201ENSMUST00000058999 643 ntBASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb1A2AQ07 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tubb1A2AQ07 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Gm15515-201ENSMUST00000117827 822 ntBASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Gm12579-201ENSMUST00000118040 783 ntBASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.8□□□□□ -0.52
Tubb1A2AQ07 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Gm18734-201ENSMUST00000172937 808 ntBASIC11.8□□□□□ -0.52
Tubb1A2AQ07 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Gm44008-201ENSMUST00000204345 412 ntBASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb1A2AQ07 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Gm4978-201ENSMUST00000071565 801 ntBASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb1A2AQ07 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb1A2AQ07 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb1A2AQ07 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms