Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
H2afb3S4R1G7 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
H2afb3S4R1G7 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
H2afb3S4R1G7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H2afb3S4R1G7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
H2afb3S4R1G7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.3■□□□□ 0.52
H2afb3S4R1G7 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.3■□□□□ 0.52
H2afb3S4R1G7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
H2afb3S4R1G7 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
H2afb3S4R1G7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.3■□□□□ 0.52
H2afb3S4R1G7 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
H2afb3S4R1G7 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
H2afb3S4R1G7 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H2afb3S4R1G7 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
H2afb3S4R1G7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
H2afb3S4R1G7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
H2afb3S4R1G7 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H2afb3S4R1G7 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H2afb3S4R1G7 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H2afb3S4R1G7 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
H2afb3S4R1G7 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
H2afb3S4R1G7 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2afb3S4R1G7 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2afb3S4R1G7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2afb3S4R1G7 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2afb3S4R1G7 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2afb3S4R1G7 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
H2afb3S4R1G7 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
H2afb3S4R1G7 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.28■□□□□ 0.52
H2afb3S4R1G7 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H2afb3S4R1G7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
H2afb3S4R1G7 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
H2afb3S4R1G7 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
H2afb3S4R1G7 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
H2afb3S4R1G7 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
H2afb3S4R1G7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
H2afb3S4R1G7 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.28■□□□□ 0.52
H2afb3S4R1G7 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
H2afb3S4R1G7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.27■□□□□ 0.52
H2afb3S4R1G7 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
H2afb3S4R1G7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
H2afb3S4R1G7 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
H2afb3S4R1G7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
H2afb3S4R1G7 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
H2afb3S4R1G7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
H2afb3S4R1G7 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
H2afb3S4R1G7 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
H2afb3S4R1G7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
H2afb3S4R1G7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
H2afb3S4R1G7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
H2afb3S4R1G7 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.26■□□□□ 0.51
H2afb3S4R1G7 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.26■□□□□ 0.51
H2afb3S4R1G7 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.26■□□□□ 0.51
H2afb3S4R1G7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
H2afb3S4R1G7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
H2afb3S4R1G7 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.26■□□□□ 0.51
H2afb3S4R1G7 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
H2afb3S4R1G7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
H2afb3S4R1G7 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
H2afb3S4R1G7 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
H2afb3S4R1G7 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
H2afb3S4R1G7 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
H2afb3S4R1G7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
H2afb3S4R1G7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
H2afb3S4R1G7 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
H2afb3S4R1G7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
H2afb3S4R1G7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
H2afb3S4R1G7 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.24■□□□□ 0.51
H2afb3S4R1G7 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
H2afb3S4R1G7 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
H2afb3S4R1G7 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.23■□□□□ 0.51
H2afb3S4R1G7 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
H2afb3S4R1G7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
H2afb3S4R1G7 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.23■□□□□ 0.51
H2afb3S4R1G7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
H2afb3S4R1G7 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
H2afb3S4R1G7 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
H2afb3S4R1G7 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
H2afb3S4R1G7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
H2afb3S4R1G7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
H2afb3S4R1G7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
H2afb3S4R1G7 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
H2afb3S4R1G7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.22■□□□□ 0.51
H2afb3S4R1G7 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.22■□□□□ 0.51
H2afb3S4R1G7 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
H2afb3S4R1G7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
H2afb3S4R1G7 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
H2afb3S4R1G7 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
H2afb3S4R1G7 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.22■□□□□ 0.51
H2afb3S4R1G7 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.22■□□□□ 0.51
H2afb3S4R1G7 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
H2afb3S4R1G7 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.22■□□□□ 0.51
H2afb3S4R1G7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
H2afb3S4R1G7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.21■□□□□ 0.51
H2afb3S4R1G7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
H2afb3S4R1G7 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.21■□□□□ 0.51
H2afb3S4R1G7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
H2afb3S4R1G7 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
H2afb3S4R1G7 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
H2afb3S4R1G7 Gm5921-201ENSMUST00000075898 882 ntBASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms