Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn8aQ9WTU3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.84■□□□□ 0.93
Scn8aQ9WTU3 Gm43137-201ENSMUST00000198052 594 ntBASIC20.84■□□□□ 0.93
Scn8aQ9WTU3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn8aQ9WTU3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn8aQ9WTU3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Scn8aQ9WTU3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scn8aQ9WTU3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.83■□□□□ 0.93
Scn8aQ9WTU3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scn8aQ9WTU3 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.83■□□□□ 0.93
Scn8aQ9WTU3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Scn8aQ9WTU3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.83■□□□□ 0.92
Scn8aQ9WTU3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
Scn8aQ9WTU3 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Scn8aQ9WTU3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Scn8aQ9WTU3 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Scn8aQ9WTU3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn8aQ9WTU3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn8aQ9WTU3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn8aQ9WTU3 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn8aQ9WTU3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.82■□□□□ 0.92
Scn8aQ9WTU3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn8aQ9WTU3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn8aQ9WTU3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn8aQ9WTU3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn8aQ9WTU3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn8aQ9WTU3 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Scn8aQ9WTU3 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Scn8aQ9WTU3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Scn8aQ9WTU3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Scn8aQ9WTU3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.81■□□□□ 0.92
Scn8aQ9WTU3 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn8aQ9WTU3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn8aQ9WTU3 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
Scn8aQ9WTU3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn8aQ9WTU3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.81■□□□□ 0.92
Scn8aQ9WTU3 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.81■□□□□ 0.92
Scn8aQ9WTU3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn8aQ9WTU3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn8aQ9WTU3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Scn8aQ9WTU3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn8aQ9WTU3 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn8aQ9WTU3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn8aQ9WTU3 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn8aQ9WTU3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Scn8aQ9WTU3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn8aQ9WTU3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Scn8aQ9WTU3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Scn8aQ9WTU3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn8aQ9WTU3 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn8aQ9WTU3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.79■□□□□ 0.92
Scn8aQ9WTU3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn8aQ9WTU3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Scn8aQ9WTU3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.78■□□□□ 0.92
Scn8aQ9WTU3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn8aQ9WTU3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn8aQ9WTU3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Scn8aQ9WTU3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.78■□□□□ 0.92
Scn8aQ9WTU3 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.78■□□□□ 0.92
Scn8aQ9WTU3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn8aQ9WTU3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Scn8aQ9WTU3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn8aQ9WTU3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Scn8aQ9WTU3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn8aQ9WTU3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn8aQ9WTU3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn8aQ9WTU3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn8aQ9WTU3 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn8aQ9WTU3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Scn8aQ9WTU3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn8aQ9WTU3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn8aQ9WTU3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn8aQ9WTU3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.76■□□□□ 0.91
Scn8aQ9WTU3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn8aQ9WTU3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn8aQ9WTU3 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scn8aQ9WTU3 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn8aQ9WTU3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn8aQ9WTU3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Scn8aQ9WTU3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn8aQ9WTU3 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.75■□□□□ 0.91
Scn8aQ9WTU3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn8aQ9WTU3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn8aQ9WTU3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Scn8aQ9WTU3 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.75■□□□□ 0.91
Scn8aQ9WTU3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn8aQ9WTU3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.74■□□□□ 0.91
Scn8aQ9WTU3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
Scn8aQ9WTU3 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scn8aQ9WTU3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scn8aQ9WTU3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.74■□□□□ 0.91
Scn8aQ9WTU3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Scn8aQ9WTU3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.74■□□□□ 0.91
Scn8aQ9WTU3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Scn8aQ9WTU3 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scn8aQ9WTU3 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Scn8aQ9WTU3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Scn8aQ9WTU3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.74■□□□□ 0.91
Scn8aQ9WTU3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn8aQ9WTU3 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms