Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col13a1Q9R1N9 Gm37179-201ENSMUST00000194862 823 ntBASIC17.36■□□□□ 0.37
Col13a1Q9R1N9 Gm42642-201ENSMUST00000200683 355 ntBASIC17.36■□□□□ 0.37
Col13a1Q9R1N9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col13a1Q9R1N9 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col13a1Q9R1N9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col13a1Q9R1N9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.36■□□□□ 0.37
Col13a1Q9R1N9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col13a1Q9R1N9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col13a1Q9R1N9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col13a1Q9R1N9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.35■□□□□ 0.37
Col13a1Q9R1N9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col13a1Q9R1N9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col13a1Q9R1N9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col13a1Q9R1N9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col13a1Q9R1N9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col13a1Q9R1N9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col13a1Q9R1N9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.34■□□□□ 0.37
Col13a1Q9R1N9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Col13a1Q9R1N9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col13a1Q9R1N9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col13a1Q9R1N9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Col13a1Q9R1N9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col13a1Q9R1N9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col13a1Q9R1N9 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col13a1Q9R1N9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col13a1Q9R1N9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.33■□□□□ 0.36
Col13a1Q9R1N9 Gm43173-201ENSMUST00000202246 593 ntBASIC17.33■□□□□ 0.36
Col13a1Q9R1N9 Gm10493-201ENSMUST00000097270 612 ntBASIC17.33■□□□□ 0.36
Col13a1Q9R1N9 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.33■□□□□ 0.36
Col13a1Q9R1N9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col13a1Q9R1N9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col13a1Q9R1N9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col13a1Q9R1N9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col13a1Q9R1N9 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.32■□□□□ 0.36
Col13a1Q9R1N9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col13a1Q9R1N9 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col13a1Q9R1N9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.32■□□□□ 0.36
Col13a1Q9R1N9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col13a1Q9R1N9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Col13a1Q9R1N9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col13a1Q9R1N9 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col13a1Q9R1N9 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Col13a1Q9R1N9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col13a1Q9R1N9 Gm10849-201ENSMUST00000100397 618 ntBASIC17.31■□□□□ 0.36
Col13a1Q9R1N9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.31■□□□□ 0.36
Col13a1Q9R1N9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col13a1Q9R1N9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Col13a1Q9R1N9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col13a1Q9R1N9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col13a1Q9R1N9 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col13a1Q9R1N9 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col13a1Q9R1N9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col13a1Q9R1N9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.3■□□□□ 0.36
Col13a1Q9R1N9 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col13a1Q9R1N9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col13a1Q9R1N9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col13a1Q9R1N9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col13a1Q9R1N9 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col13a1Q9R1N9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col13a1Q9R1N9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col13a1Q9R1N9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col13a1Q9R1N9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col13a1Q9R1N9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col13a1Q9R1N9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col13a1Q9R1N9 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col13a1Q9R1N9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col13a1Q9R1N9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Col13a1Q9R1N9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col13a1Q9R1N9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.28■□□□□ 0.36
Col13a1Q9R1N9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Col13a1Q9R1N9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Col13a1Q9R1N9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.28■□□□□ 0.36
Col13a1Q9R1N9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col13a1Q9R1N9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col13a1Q9R1N9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.27■□□□□ 0.36
Col13a1Q9R1N9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col13a1Q9R1N9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col13a1Q9R1N9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.27■□□□□ 0.36
Col13a1Q9R1N9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col13a1Q9R1N9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col13a1Q9R1N9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.27■□□□□ 0.36
Col13a1Q9R1N9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.27■□□□□ 0.36
Col13a1Q9R1N9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Col13a1Q9R1N9 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
Col13a1Q9R1N9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col13a1Q9R1N9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Col13a1Q9R1N9 Gm12251-201ENSMUST00000117893 792 ntBASIC17.26■□□□□ 0.35
Col13a1Q9R1N9 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.26■□□□□ 0.35
Col13a1Q9R1N9 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.26■□□□□ 0.35
Col13a1Q9R1N9 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.26■□□□□ 0.35
Col13a1Q9R1N9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col13a1Q9R1N9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col13a1Q9R1N9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Col13a1Q9R1N9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Col13a1Q9R1N9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col13a1Q9R1N9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col13a1Q9R1N9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col13a1Q9R1N9 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col13a1Q9R1N9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms