Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Msh5Q9QUM7 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Msh5Q9QUM7 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Msh5Q9QUM7 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Msh5Q9QUM7 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Msh5Q9QUM7 Gm5812-201ENSMUST00000061073 957 ntBASIC20.72■□□□□ 0.91
Msh5Q9QUM7 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Msh5Q9QUM7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Msh5Q9QUM7 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Msh5Q9QUM7 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Msh5Q9QUM7 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Msh5Q9QUM7 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Msh5Q9QUM7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Msh5Q9QUM7 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Msh5Q9QUM7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Msh5Q9QUM7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Msh5Q9QUM7 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Msh5Q9QUM7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Msh5Q9QUM7 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Msh5Q9QUM7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Msh5Q9QUM7 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Msh5Q9QUM7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Msh5Q9QUM7 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Msh5Q9QUM7 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Msh5Q9QUM7 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Msh5Q9QUM7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msh5Q9QUM7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msh5Q9QUM7 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Msh5Q9QUM7 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Msh5Q9QUM7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msh5Q9QUM7 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msh5Q9QUM7 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.69■□□□□ 0.9
Msh5Q9QUM7 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Msh5Q9QUM7 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msh5Q9QUM7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Msh5Q9QUM7 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Msh5Q9QUM7 Gm10232-201ENSMUST00000089221 720 ntBASIC20.69■□□□□ 0.9
Msh5Q9QUM7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msh5Q9QUM7 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msh5Q9QUM7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Msh5Q9QUM7 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msh5Q9QUM7 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Msh5Q9QUM7 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Msh5Q9QUM7 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Msh5Q9QUM7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Msh5Q9QUM7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Msh5Q9QUM7 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Msh5Q9QUM7 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Msh5Q9QUM7 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Msh5Q9QUM7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Msh5Q9QUM7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Msh5Q9QUM7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Msh5Q9QUM7 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Msh5Q9QUM7 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Msh5Q9QUM7 Gm15820-201ENSMUST00000201566 728 ntBASIC20.67■□□□□ 0.9
Msh5Q9QUM7 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Msh5Q9QUM7 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.67■□□□□ 0.9
Msh5Q9QUM7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Msh5Q9QUM7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Msh5Q9QUM7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Msh5Q9QUM7 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.66■□□□□ 0.9
Msh5Q9QUM7 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Msh5Q9QUM7 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.66■□□□□ 0.9
Msh5Q9QUM7 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Msh5Q9QUM7 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Msh5Q9QUM7 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Msh5Q9QUM7 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Msh5Q9QUM7 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Msh5Q9QUM7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Msh5Q9QUM7 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Msh5Q9QUM7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
Msh5Q9QUM7 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.65■□□□□ 0.9
Msh5Q9QUM7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Msh5Q9QUM7 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Msh5Q9QUM7 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.64■□□□□ 0.89
Msh5Q9QUM7 Gm15546-201ENSMUST00000122095 826 ntBASIC20.64■□□□□ 0.89
Msh5Q9QUM7 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.64■□□□□ 0.89
Msh5Q9QUM7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Msh5Q9QUM7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Msh5Q9QUM7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Msh5Q9QUM7 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Msh5Q9QUM7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Msh5Q9QUM7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.64■□□□□ 0.89
Msh5Q9QUM7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Msh5Q9QUM7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Msh5Q9QUM7 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Msh5Q9QUM7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Msh5Q9QUM7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Msh5Q9QUM7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Msh5Q9QUM7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Msh5Q9QUM7 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Msh5Q9QUM7 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.63■□□□□ 0.89
Msh5Q9QUM7 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Msh5Q9QUM7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Msh5Q9QUM7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Msh5Q9QUM7 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.63■□□□□ 0.89
Msh5Q9QUM7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Msh5Q9QUM7 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Msh5Q9QUM7 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Msh5Q9QUM7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms