Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SrfQ9JM73 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.48■□□□□ 0.71
SrfQ9JM73 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SrfQ9JM73 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.48■□□□□ 0.71
SrfQ9JM73 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SrfQ9JM73 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SrfQ9JM73 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SrfQ9JM73 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SrfQ9JM73 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SrfQ9JM73 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.47■□□□□ 0.71
SrfQ9JM73 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SrfQ9JM73 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SrfQ9JM73 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SrfQ9JM73 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SrfQ9JM73 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SrfQ9JM73 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.47■□□□□ 0.71
SrfQ9JM73 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.46■□□□□ 0.71
SrfQ9JM73 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SrfQ9JM73 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SrfQ9JM73 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.46■□□□□ 0.71
SrfQ9JM73 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.46■□□□□ 0.71
SrfQ9JM73 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SrfQ9JM73 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SrfQ9JM73 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SrfQ9JM73 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SrfQ9JM73 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SrfQ9JM73 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SrfQ9JM73 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SrfQ9JM73 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.45■□□□□ 0.7
SrfQ9JM73 Gm18671-201ENSMUST00000214826 683 ntBASIC19.45■□□□□ 0.7
SrfQ9JM73 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SrfQ9JM73 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.45■□□□□ 0.7
SrfQ9JM73 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SrfQ9JM73 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SrfQ9JM73 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.44■□□□□ 0.7
SrfQ9JM73 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SrfQ9JM73 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SrfQ9JM73 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SrfQ9JM73 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SrfQ9JM73 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SrfQ9JM73 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SrfQ9JM73 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SrfQ9JM73 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SrfQ9JM73 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SrfQ9JM73 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.43■□□□□ 0.7
SrfQ9JM73 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SrfQ9JM73 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SrfQ9JM73 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SrfQ9JM73 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SrfQ9JM73 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SrfQ9JM73 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.42■□□□□ 0.7
SrfQ9JM73 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SrfQ9JM73 Gm37179-201ENSMUST00000194862 823 ntBASIC19.42■□□□□ 0.7
SrfQ9JM73 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SrfQ9JM73 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SrfQ9JM73 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SrfQ9JM73 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SrfQ9JM73 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.42■□□□□ 0.7
SrfQ9JM73 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SrfQ9JM73 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.42■□□□□ 0.7
SrfQ9JM73 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SrfQ9JM73 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SrfQ9JM73 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SrfQ9JM73 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SrfQ9JM73 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SrfQ9JM73 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.41■□□□□ 0.7
SrfQ9JM73 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SrfQ9JM73 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SrfQ9JM73 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SrfQ9JM73 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.4■□□□□ 0.7
SrfQ9JM73 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SrfQ9JM73 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SrfQ9JM73 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SrfQ9JM73 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SrfQ9JM73 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.39■□□□□ 0.7
SrfQ9JM73 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SrfQ9JM73 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SrfQ9JM73 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SrfQ9JM73 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
SrfQ9JM73 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.39■□□□□ 0.69
SrfQ9JM73 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SrfQ9JM73 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SrfQ9JM73 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SrfQ9JM73 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SrfQ9JM73 Gm11421-201ENSMUST00000122124 294 ntBASIC19.38■□□□□ 0.69
SrfQ9JM73 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.38■□□□□ 0.69
SrfQ9JM73 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SrfQ9JM73 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SrfQ9JM73 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SrfQ9JM73 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SrfQ9JM73 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SrfQ9JM73 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SrfQ9JM73 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SrfQ9JM73 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SrfQ9JM73 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SrfQ9JM73 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SrfQ9JM73 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.37■□□□□ 0.69
SrfQ9JM73 AV356131-201ENSMUST00000206201 750 ntBASIC19.37■□□□□ 0.69
SrfQ9JM73 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SrfQ9JM73 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms