Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tubb3Q9ERD7 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tubb3Q9ERD7 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Tubb3Q9ERD7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tubb3Q9ERD7 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tubb3Q9ERD7 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tubb3Q9ERD7 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tubb3Q9ERD7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tubb3Q9ERD7 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tubb3Q9ERD7 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tubb3Q9ERD7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tubb3Q9ERD7 Gm7417-201ENSMUST00000192950 473 ntBASIC20.28■□□□□ 0.84
Tubb3Q9ERD7 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.28■□□□□ 0.84
Tubb3Q9ERD7 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tubb3Q9ERD7 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Tubb3Q9ERD7 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tubb3Q9ERD7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tubb3Q9ERD7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tubb3Q9ERD7 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tubb3Q9ERD7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tubb3Q9ERD7 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.27■□□□□ 0.84
Tubb3Q9ERD7 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.27■□□□□ 0.84
Tubb3Q9ERD7 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.27■□□□□ 0.84
Tubb3Q9ERD7 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tubb3Q9ERD7 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tubb3Q9ERD7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tubb3Q9ERD7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tubb3Q9ERD7 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tubb3Q9ERD7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.27■□□□□ 0.83
Tubb3Q9ERD7 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tubb3Q9ERD7 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tubb3Q9ERD7 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tubb3Q9ERD7 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tubb3Q9ERD7 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.26■□□□□ 0.83
Tubb3Q9ERD7 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tubb3Q9ERD7 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.26■□□□□ 0.83
Tubb3Q9ERD7 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tubb3Q9ERD7 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tubb3Q9ERD7 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tubb3Q9ERD7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.26■□□□□ 0.83
Tubb3Q9ERD7 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tubb3Q9ERD7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tubb3Q9ERD7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tubb3Q9ERD7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tubb3Q9ERD7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tubb3Q9ERD7 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.26■□□□□ 0.83
Tubb3Q9ERD7 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tubb3Q9ERD7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Tubb3Q9ERD7 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Tubb3Q9ERD7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Tubb3Q9ERD7 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.25■□□□□ 0.83
Tubb3Q9ERD7 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tubb3Q9ERD7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Tubb3Q9ERD7 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.25■□□□□ 0.83
Tubb3Q9ERD7 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.25■□□□□ 0.83
Tubb3Q9ERD7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tubb3Q9ERD7 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Tubb3Q9ERD7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Tubb3Q9ERD7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tubb3Q9ERD7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tubb3Q9ERD7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.24■□□□□ 0.83
Tubb3Q9ERD7 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tubb3Q9ERD7 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.24■□□□□ 0.83
Tubb3Q9ERD7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tubb3Q9ERD7 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tubb3Q9ERD7 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Tubb3Q9ERD7 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.24■□□□□ 0.83
Tubb3Q9ERD7 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tubb3Q9ERD7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Tubb3Q9ERD7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Tubb3Q9ERD7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tubb3Q9ERD7 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.23■□□□□ 0.83
Tubb3Q9ERD7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tubb3Q9ERD7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tubb3Q9ERD7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.23■□□□□ 0.83
Tubb3Q9ERD7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tubb3Q9ERD7 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Tubb3Q9ERD7 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tubb3Q9ERD7 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tubb3Q9ERD7 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tubb3Q9ERD7 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tubb3Q9ERD7 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tubb3Q9ERD7 Gm40881-201ENSMUST00000223397 166 ntBASIC20.22■□□□□ 0.83
Tubb3Q9ERD7 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tubb3Q9ERD7 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tubb3Q9ERD7 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tubb3Q9ERD7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tubb3Q9ERD7 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Tubb3Q9ERD7 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tubb3Q9ERD7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Tubb3Q9ERD7 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tubb3Q9ERD7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tubb3Q9ERD7 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.21■□□□□ 0.83
Tubb3Q9ERD7 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.21■□□□□ 0.83
Tubb3Q9ERD7 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tubb3Q9ERD7 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tubb3Q9ERD7 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tubb3Q9ERD7 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tubb3Q9ERD7 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tubb3Q9ERD7 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms