Protein–RNA interactions for Protein: Q9EQ52

Vmn1r48, Vomeronasal type-1 receptor 48, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r48Q9EQ52 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vmn1r48Q9EQ52 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vmn1r48Q9EQ52 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vmn1r48Q9EQ52 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vmn1r48Q9EQ52 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vmn1r48Q9EQ52 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.61■□□□□ 0.41
Vmn1r48Q9EQ52 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.61■□□□□ 0.41
Vmn1r48Q9EQ52 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vmn1r48Q9EQ52 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vmn1r48Q9EQ52 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vmn1r48Q9EQ52 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vmn1r48Q9EQ52 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vmn1r48Q9EQ52 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Vmn1r48Q9EQ52 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Vmn1r48Q9EQ52 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.6■□□□□ 0.41
Vmn1r48Q9EQ52 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vmn1r48Q9EQ52 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vmn1r48Q9EQ52 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vmn1r48Q9EQ52 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vmn1r48Q9EQ52 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vmn1r48Q9EQ52 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vmn1r48Q9EQ52 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vmn1r48Q9EQ52 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vmn1r48Q9EQ52 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vmn1r48Q9EQ52 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.59■□□□□ 0.41
Vmn1r48Q9EQ52 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Vmn1r48Q9EQ52 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vmn1r48Q9EQ52 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vmn1r48Q9EQ52 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vmn1r48Q9EQ52 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vmn1r48Q9EQ52 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Vmn1r48Q9EQ52 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Vmn1r48Q9EQ52 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vmn1r48Q9EQ52 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vmn1r48Q9EQ52 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vmn1r48Q9EQ52 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Vmn1r48Q9EQ52 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Vmn1r48Q9EQ52 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.58■□□□□ 0.4
Vmn1r48Q9EQ52 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vmn1r48Q9EQ52 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vmn1r48Q9EQ52 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vmn1r48Q9EQ52 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vmn1r48Q9EQ52 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vmn1r48Q9EQ52 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.57■□□□□ 0.4
Vmn1r48Q9EQ52 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vmn1r48Q9EQ52 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vmn1r48Q9EQ52 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vmn1r48Q9EQ52 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vmn1r48Q9EQ52 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.57■□□□□ 0.4
Vmn1r48Q9EQ52 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vmn1r48Q9EQ52 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vmn1r48Q9EQ52 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vmn1r48Q9EQ52 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vmn1r48Q9EQ52 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Vmn1r48Q9EQ52 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vmn1r48Q9EQ52 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vmn1r48Q9EQ52 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vmn1r48Q9EQ52 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vmn1r48Q9EQ52 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vmn1r48Q9EQ52 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vmn1r48Q9EQ52 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vmn1r48Q9EQ52 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vmn1r48Q9EQ52 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vmn1r48Q9EQ52 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vmn1r48Q9EQ52 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vmn1r48Q9EQ52 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.56■□□□□ 0.4
Vmn1r48Q9EQ52 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Vmn1r48Q9EQ52 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vmn1r48Q9EQ52 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vmn1r48Q9EQ52 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vmn1r48Q9EQ52 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vmn1r48Q9EQ52 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
Vmn1r48Q9EQ52 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.55■□□□□ 0.4
Vmn1r48Q9EQ52 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.55■□□□□ 0.4
Vmn1r48Q9EQ52 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vmn1r48Q9EQ52 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vmn1r48Q9EQ52 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vmn1r48Q9EQ52 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vmn1r48Q9EQ52 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vmn1r48Q9EQ52 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vmn1r48Q9EQ52 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Vmn1r48Q9EQ52 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vmn1r48Q9EQ52 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vmn1r48Q9EQ52 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vmn1r48Q9EQ52 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vmn1r48Q9EQ52 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.54■□□□□ 0.4
Vmn1r48Q9EQ52 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vmn1r48Q9EQ52 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vmn1r48Q9EQ52 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vmn1r48Q9EQ52 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vmn1r48Q9EQ52 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vmn1r48Q9EQ52 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vmn1r48Q9EQ52 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.53■□□□□ 0.4
Vmn1r48Q9EQ52 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vmn1r48Q9EQ52 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vmn1r48Q9EQ52 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Vmn1r48Q9EQ52 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vmn1r48Q9EQ52 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vmn1r48Q9EQ52 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.53■□□□□ 0.4
Vmn1r48Q9EQ52 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms