Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Upf1Q9EPU0 Reep4-203ENSMUST00000226563 1444 ntBASIC23.91■■□□□ 1.42
Upf1Q9EPU0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Upf1Q9EPU0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Upf1Q9EPU0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC23.9■■□□□ 1.42
Upf1Q9EPU0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Upf1Q9EPU0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Upf1Q9EPU0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Upf1Q9EPU0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC23.9■■□□□ 1.42
Upf1Q9EPU0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Upf1Q9EPU0 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
Upf1Q9EPU0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC23.9■■□□□ 1.42
Upf1Q9EPU0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Upf1Q9EPU0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Upf1Q9EPU0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Upf1Q9EPU0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
Upf1Q9EPU0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Upf1Q9EPU0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
Upf1Q9EPU0 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Upf1Q9EPU0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Upf1Q9EPU0 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC23.88■■□□□ 1.41
Upf1Q9EPU0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Upf1Q9EPU0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Upf1Q9EPU0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Upf1Q9EPU0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC23.87■■□□□ 1.41
Upf1Q9EPU0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC23.87■■□□□ 1.41
Upf1Q9EPU0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Upf1Q9EPU0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Upf1Q9EPU0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Upf1Q9EPU0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Upf1Q9EPU0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Upf1Q9EPU0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Upf1Q9EPU0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC23.86■■□□□ 1.41
Upf1Q9EPU0 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC23.86■■□□□ 1.41
Upf1Q9EPU0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC23.86■■□□□ 1.41
Upf1Q9EPU0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Upf1Q9EPU0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Upf1Q9EPU0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Upf1Q9EPU0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Upf1Q9EPU0 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Upf1Q9EPU0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Upf1Q9EPU0 Gm14281-201ENSMUST00000121700 1294 ntBASIC23.85■■□□□ 1.41
Upf1Q9EPU0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Upf1Q9EPU0 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC23.85■■□□□ 1.41
Upf1Q9EPU0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Upf1Q9EPU0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Upf1Q9EPU0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Upf1Q9EPU0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC23.84■■□□□ 1.41
Upf1Q9EPU0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC23.84■■□□□ 1.41
Upf1Q9EPU0 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
Upf1Q9EPU0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC23.83■■□□□ 1.41
Upf1Q9EPU0 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
Upf1Q9EPU0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC23.83■■□□□ 1.41
Upf1Q9EPU0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Upf1Q9EPU0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Upf1Q9EPU0 Gm43859-201ENSMUST00000200075 1412 ntBASIC23.83■■□□□ 1.4
Upf1Q9EPU0 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC23.82■■□□□ 1.4
Upf1Q9EPU0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Upf1Q9EPU0 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Upf1Q9EPU0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Upf1Q9EPU0 Gm37856-201ENSMUST00000191634 999 ntBASIC23.82■■□□□ 1.4
Upf1Q9EPU0 Gm5408-201ENSMUST00000197998 747 ntBASIC23.82■■□□□ 1.4
Upf1Q9EPU0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Upf1Q9EPU0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Upf1Q9EPU0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC23.82■■□□□ 1.4
Upf1Q9EPU0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Upf1Q9EPU0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Upf1Q9EPU0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Upf1Q9EPU0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Upf1Q9EPU0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Upf1Q9EPU0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Upf1Q9EPU0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC23.81■■□□□ 1.4
Upf1Q9EPU0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Upf1Q9EPU0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Upf1Q9EPU0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC23.81■■□□□ 1.4
Upf1Q9EPU0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Upf1Q9EPU0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Upf1Q9EPU0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Upf1Q9EPU0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
Upf1Q9EPU0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Upf1Q9EPU0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Upf1Q9EPU0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Upf1Q9EPU0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Upf1Q9EPU0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Upf1Q9EPU0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC23.8■■□□□ 1.4
Upf1Q9EPU0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Upf1Q9EPU0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
Upf1Q9EPU0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Upf1Q9EPU0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Upf1Q9EPU0 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Upf1Q9EPU0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
Upf1Q9EPU0 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Upf1Q9EPU0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Upf1Q9EPU0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Upf1Q9EPU0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Upf1Q9EPU0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Upf1Q9EPU0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC23.79■■□□□ 1.4
Upf1Q9EPU0 Gm13148-201ENSMUST00000118892 745 ntBASIC23.79■■□□□ 1.4
Upf1Q9EPU0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Upf1Q9EPU0 AC137127.1-201ENSMUST00000213466 1078 ntBASIC23.79■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms