Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sh2d4aQ9D7V1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sh2d4aQ9D7V1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sh2d4aQ9D7V1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sh2d4aQ9D7V1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sh2d4aQ9D7V1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.68■□□□□ 0.74
Sh2d4aQ9D7V1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sh2d4aQ9D7V1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sh2d4aQ9D7V1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sh2d4aQ9D7V1 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sh2d4aQ9D7V1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Sh2d4aQ9D7V1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Sh2d4aQ9D7V1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2d4aQ9D7V1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Sh2d4aQ9D7V1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2d4aQ9D7V1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2d4aQ9D7V1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2d4aQ9D7V1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2d4aQ9D7V1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2d4aQ9D7V1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2d4aQ9D7V1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2d4aQ9D7V1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2d4aQ9D7V1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Sh2d4aQ9D7V1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh2d4aQ9D7V1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.66■□□□□ 0.74
Sh2d4aQ9D7V1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Sh2d4aQ9D7V1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh2d4aQ9D7V1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh2d4aQ9D7V1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh2d4aQ9D7V1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sh2d4aQ9D7V1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh2d4aQ9D7V1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.65■□□□□ 0.74
Sh2d4aQ9D7V1 Gm12366-201ENSMUST00000121722 873 ntBASIC19.65■□□□□ 0.74
Sh2d4aQ9D7V1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.65■□□□□ 0.74
Sh2d4aQ9D7V1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Sh2d4aQ9D7V1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh2d4aQ9D7V1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.65■□□□□ 0.74
Sh2d4aQ9D7V1 Gm5786-201ENSMUST00000085368 882 ntBASIC19.65■□□□□ 0.74
Sh2d4aQ9D7V1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.65■□□□□ 0.74
Sh2d4aQ9D7V1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh2d4aQ9D7V1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh2d4aQ9D7V1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Sh2d4aQ9D7V1 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Sh2d4aQ9D7V1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.64■□□□□ 0.73
Sh2d4aQ9D7V1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Sh2d4aQ9D7V1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh2d4aQ9D7V1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh2d4aQ9D7V1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh2d4aQ9D7V1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh2d4aQ9D7V1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh2d4aQ9D7V1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh2d4aQ9D7V1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sh2d4aQ9D7V1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.63■□□□□ 0.73
Sh2d4aQ9D7V1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Sh2d4aQ9D7V1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh2d4aQ9D7V1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sh2d4aQ9D7V1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.63■□□□□ 0.73
Sh2d4aQ9D7V1 Gm10420-201ENSMUST00000121713 882 ntBASIC19.63■□□□□ 0.73
Sh2d4aQ9D7V1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sh2d4aQ9D7V1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh2d4aQ9D7V1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Sh2d4aQ9D7V1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh2d4aQ9D7V1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh2d4aQ9D7V1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh2d4aQ9D7V1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh2d4aQ9D7V1 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Sh2d4aQ9D7V1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Sh2d4aQ9D7V1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh2d4aQ9D7V1 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh2d4aQ9D7V1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh2d4aQ9D7V1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh2d4aQ9D7V1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sh2d4aQ9D7V1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sh2d4aQ9D7V1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sh2d4aQ9D7V1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sh2d4aQ9D7V1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sh2d4aQ9D7V1 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sh2d4aQ9D7V1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh2d4aQ9D7V1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh2d4aQ9D7V1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Sh2d4aQ9D7V1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh2d4aQ9D7V1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh2d4aQ9D7V1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh2d4aQ9D7V1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh2d4aQ9D7V1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh2d4aQ9D7V1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh2d4aQ9D7V1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh2d4aQ9D7V1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh2d4aQ9D7V1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Sh2d4aQ9D7V1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Sh2d4aQ9D7V1 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh2d4aQ9D7V1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh2d4aQ9D7V1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh2d4aQ9D7V1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.59■□□□□ 0.73
Sh2d4aQ9D7V1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sh2d4aQ9D7V1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh2d4aQ9D7V1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh2d4aQ9D7V1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh2d4aQ9D7V1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh2d4aQ9D7V1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms