Protein–RNA interactions for Protein: Q9D4C9

Clvs1, Clavesin-1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clvs1Q9D4C9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clvs1Q9D4C9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clvs1Q9D4C9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.85■□□□□ 0.61
Clvs1Q9D4C9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clvs1Q9D4C9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clvs1Q9D4C9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clvs1Q9D4C9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clvs1Q9D4C9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Clvs1Q9D4C9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.84■□□□□ 0.61
Clvs1Q9D4C9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clvs1Q9D4C9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clvs1Q9D4C9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Clvs1Q9D4C9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clvs1Q9D4C9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Clvs1Q9D4C9 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clvs1Q9D4C9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clvs1Q9D4C9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Clvs1Q9D4C9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.83■□□□□ 0.6
Clvs1Q9D4C9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.83■□□□□ 0.6
Clvs1Q9D4C9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clvs1Q9D4C9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clvs1Q9D4C9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clvs1Q9D4C9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Clvs1Q9D4C9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clvs1Q9D4C9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clvs1Q9D4C9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clvs1Q9D4C9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Clvs1Q9D4C9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Clvs1Q9D4C9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clvs1Q9D4C9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clvs1Q9D4C9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clvs1Q9D4C9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.82■□□□□ 0.6
Clvs1Q9D4C9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clvs1Q9D4C9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clvs1Q9D4C9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Clvs1Q9D4C9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Clvs1Q9D4C9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clvs1Q9D4C9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clvs1Q9D4C9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.81■□□□□ 0.6
Clvs1Q9D4C9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clvs1Q9D4C9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Clvs1Q9D4C9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clvs1Q9D4C9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clvs1Q9D4C9 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.8■□□□□ 0.6
Clvs1Q9D4C9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clvs1Q9D4C9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clvs1Q9D4C9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clvs1Q9D4C9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clvs1Q9D4C9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clvs1Q9D4C9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clvs1Q9D4C9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Clvs1Q9D4C9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.79■□□□□ 0.6
Clvs1Q9D4C9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clvs1Q9D4C9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Clvs1Q9D4C9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clvs1Q9D4C9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clvs1Q9D4C9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clvs1Q9D4C9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clvs1Q9D4C9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.78■□□□□ 0.6
Clvs1Q9D4C9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clvs1Q9D4C9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.78■□□□□ 0.6
Clvs1Q9D4C9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clvs1Q9D4C9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Clvs1Q9D4C9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Clvs1Q9D4C9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clvs1Q9D4C9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clvs1Q9D4C9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clvs1Q9D4C9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clvs1Q9D4C9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
Clvs1Q9D4C9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.77■□□□□ 0.6
Clvs1Q9D4C9 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.77■□□□□ 0.6
Clvs1Q9D4C9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clvs1Q9D4C9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Clvs1Q9D4C9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clvs1Q9D4C9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Clvs1Q9D4C9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Clvs1Q9D4C9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Clvs1Q9D4C9 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Clvs1Q9D4C9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clvs1Q9D4C9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clvs1Q9D4C9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Clvs1Q9D4C9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clvs1Q9D4C9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.76■□□□□ 0.59
Clvs1Q9D4C9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clvs1Q9D4C9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clvs1Q9D4C9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Clvs1Q9D4C9 Golph3-205ENSMUST00000228671 2842 ntBASIC18.76■□□□□ 0.59
Clvs1Q9D4C9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clvs1Q9D4C9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Clvs1Q9D4C9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clvs1Q9D4C9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clvs1Q9D4C9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clvs1Q9D4C9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clvs1Q9D4C9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Clvs1Q9D4C9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.75■□□□□ 0.59
Clvs1Q9D4C9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clvs1Q9D4C9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clvs1Q9D4C9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.74■□□□□ 0.59
Clvs1Q9D4C9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Clvs1Q9D4C9 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 113.6 ms