Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim42Q9D2H5 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim42Q9D2H5 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim42Q9D2H5 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Trim42Q9D2H5 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim42Q9D2H5 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.27■□□□□ 0.84
Trim42Q9D2H5 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.27■□□□□ 0.84
Trim42Q9D2H5 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.27■□□□□ 0.84
Trim42Q9D2H5 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim42Q9D2H5 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim42Q9D2H5 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim42Q9D2H5 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.27■□□□□ 0.83
Trim42Q9D2H5 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Trim42Q9D2H5 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trim42Q9D2H5 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim42Q9D2H5 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim42Q9D2H5 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Trim42Q9D2H5 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim42Q9D2H5 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim42Q9D2H5 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim42Q9D2H5 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.26■□□□□ 0.83
Trim42Q9D2H5 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim42Q9D2H5 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim42Q9D2H5 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim42Q9D2H5 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim42Q9D2H5 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim42Q9D2H5 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim42Q9D2H5 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim42Q9D2H5 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim42Q9D2H5 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim42Q9D2H5 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim42Q9D2H5 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim42Q9D2H5 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim42Q9D2H5 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim42Q9D2H5 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim42Q9D2H5 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Trim42Q9D2H5 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim42Q9D2H5 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim42Q9D2H5 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim42Q9D2H5 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim42Q9D2H5 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim42Q9D2H5 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim42Q9D2H5 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim42Q9D2H5 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Trim42Q9D2H5 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim42Q9D2H5 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim42Q9D2H5 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim42Q9D2H5 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim42Q9D2H5 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim42Q9D2H5 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim42Q9D2H5 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim42Q9D2H5 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim42Q9D2H5 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Trim42Q9D2H5 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim42Q9D2H5 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Trim42Q9D2H5 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim42Q9D2H5 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim42Q9D2H5 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim42Q9D2H5 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim42Q9D2H5 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim42Q9D2H5 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim42Q9D2H5 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim42Q9D2H5 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim42Q9D2H5 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim42Q9D2H5 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim42Q9D2H5 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Trim42Q9D2H5 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim42Q9D2H5 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.22■□□□□ 0.83
Trim42Q9D2H5 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim42Q9D2H5 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim42Q9D2H5 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Trim42Q9D2H5 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trim42Q9D2H5 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trim42Q9D2H5 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim42Q9D2H5 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim42Q9D2H5 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim42Q9D2H5 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Trim42Q9D2H5 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.21■□□□□ 0.83
Trim42Q9D2H5 Gm9806-201ENSMUST00000051080 552 ntBASIC20.21■□□□□ 0.83
Trim42Q9D2H5 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim42Q9D2H5 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim42Q9D2H5 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.2■□□□□ 0.82
Trim42Q9D2H5 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.2■□□□□ 0.82
Trim42Q9D2H5 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.2■□□□□ 0.82
Trim42Q9D2H5 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Trim42Q9D2H5 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim42Q9D2H5 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim42Q9D2H5 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim42Q9D2H5 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Trim42Q9D2H5 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.2■□□□□ 0.82
Trim42Q9D2H5 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.2■□□□□ 0.82
Trim42Q9D2H5 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim42Q9D2H5 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim42Q9D2H5 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Trim42Q9D2H5 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.19■□□□□ 0.82
Trim42Q9D2H5 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim42Q9D2H5 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim42Q9D2H5 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim42Q9D2H5 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim42Q9D2H5 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms