Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
Ssu72Q9CY97 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ssu72Q9CY97 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ssu72Q9CY97 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ssu72Q9CY97 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.36■□□□□ 0.85
Ssu72Q9CY97 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ssu72Q9CY97 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.36■□□□□ 0.85
Ssu72Q9CY97 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Ssu72Q9CY97 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Ssu72Q9CY97 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.35■□□□□ 0.85
Ssu72Q9CY97 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ssu72Q9CY97 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ssu72Q9CY97 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Ssu72Q9CY97 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Ssu72Q9CY97 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ssu72Q9CY97 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.35■□□□□ 0.85
Ssu72Q9CY97 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Ssu72Q9CY97 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ssu72Q9CY97 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ssu72Q9CY97 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ssu72Q9CY97 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.34■□□□□ 0.85
Ssu72Q9CY97 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ssu72Q9CY97 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ssu72Q9CY97 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ssu72Q9CY97 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.34■□□□□ 0.85
Ssu72Q9CY97 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
Ssu72Q9CY97 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ssu72Q9CY97 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ssu72Q9CY97 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Ssu72Q9CY97 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ssu72Q9CY97 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Ssu72Q9CY97 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.34■□□□□ 0.85
Ssu72Q9CY97 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ssu72Q9CY97 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ssu72Q9CY97 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ssu72Q9CY97 Gm14523-201ENSMUST00000117260 558 ntBASIC20.33■□□□□ 0.85
Ssu72Q9CY97 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ssu72Q9CY97 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Ssu72Q9CY97 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.33■□□□□ 0.85
Ssu72Q9CY97 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ssu72Q9CY97 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ssu72Q9CY97 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ssu72Q9CY97 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ssu72Q9CY97 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ssu72Q9CY97 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ssu72Q9CY97 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ssu72Q9CY97 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ssu72Q9CY97 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.32■□□□□ 0.84
Ssu72Q9CY97 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ssu72Q9CY97 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.32■□□□□ 0.84
Ssu72Q9CY97 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ssu72Q9CY97 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ssu72Q9CY97 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Ssu72Q9CY97 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Ssu72Q9CY97 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ssu72Q9CY97 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ssu72Q9CY97 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ssu72Q9CY97 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.31■□□□□ 0.84
Ssu72Q9CY97 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ssu72Q9CY97 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ssu72Q9CY97 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ssu72Q9CY97 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ssu72Q9CY97 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ssu72Q9CY97 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ssu72Q9CY97 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ssu72Q9CY97 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ssu72Q9CY97 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ssu72Q9CY97 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ssu72Q9CY97 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ssu72Q9CY97 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ssu72Q9CY97 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Ssu72Q9CY97 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ssu72Q9CY97 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ssu72Q9CY97 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Ssu72Q9CY97 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ssu72Q9CY97 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.28■□□□□ 0.84
Ssu72Q9CY97 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Ssu72Q9CY97 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ssu72Q9CY97 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.28■□□□□ 0.84
Ssu72Q9CY97 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Ssu72Q9CY97 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ssu72Q9CY97 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ssu72Q9CY97 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ssu72Q9CY97 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ssu72Q9CY97 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.28■□□□□ 0.84
Ssu72Q9CY97 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ssu72Q9CY97 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ssu72Q9CY97 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ssu72Q9CY97 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ssu72Q9CY97 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.27■□□□□ 0.84
Ssu72Q9CY97 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ssu72Q9CY97 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ssu72Q9CY97 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.27■□□□□ 0.84
Ssu72Q9CY97 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ssu72Q9CY97 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ssu72Q9CY97 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Ssu72Q9CY97 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ssu72Q9CY97 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ssu72Q9CY97 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ssu72Q9CY97 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms