Protein–RNA interactions for Protein: Q9CXE0

Prdm5, PR domain zinc finger protein 5, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm5Q9CXE0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prdm5Q9CXE0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Prdm5Q9CXE0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prdm5Q9CXE0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Prdm5Q9CXE0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prdm5Q9CXE0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prdm5Q9CXE0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.28■□□□□ 0.68
Prdm5Q9CXE0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prdm5Q9CXE0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prdm5Q9CXE0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prdm5Q9CXE0 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.27■□□□□ 0.68
Prdm5Q9CXE0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.27■□□□□ 0.68
Prdm5Q9CXE0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.27■□□□□ 0.68
Prdm5Q9CXE0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.27■□□□□ 0.68
Prdm5Q9CXE0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prdm5Q9CXE0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Prdm5Q9CXE0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Prdm5Q9CXE0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Prdm5Q9CXE0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.26■□□□□ 0.67
Prdm5Q9CXE0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Prdm5Q9CXE0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prdm5Q9CXE0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prdm5Q9CXE0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prdm5Q9CXE0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prdm5Q9CXE0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prdm5Q9CXE0 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.25■□□□□ 0.67
Prdm5Q9CXE0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prdm5Q9CXE0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prdm5Q9CXE0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prdm5Q9CXE0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Prdm5Q9CXE0 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.25■□□□□ 0.67
Prdm5Q9CXE0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Prdm5Q9CXE0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.25■□□□□ 0.67
Prdm5Q9CXE0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prdm5Q9CXE0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prdm5Q9CXE0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prdm5Q9CXE0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prdm5Q9CXE0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Prdm5Q9CXE0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prdm5Q9CXE0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prdm5Q9CXE0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prdm5Q9CXE0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prdm5Q9CXE0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Prdm5Q9CXE0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Prdm5Q9CXE0 Etf1-202ENSMUST00000180351 108 ntBASIC19.23■□□□□ 0.67
Prdm5Q9CXE0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.23■□□□□ 0.67
Prdm5Q9CXE0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.23■□□□□ 0.67
Prdm5Q9CXE0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Prdm5Q9CXE0 Rps24-207ENSMUST00000224568 714 ntBASIC19.23■□□□□ 0.67
Prdm5Q9CXE0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prdm5Q9CXE0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Prdm5Q9CXE0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prdm5Q9CXE0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prdm5Q9CXE0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Prdm5Q9CXE0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prdm5Q9CXE0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prdm5Q9CXE0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prdm5Q9CXE0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prdm5Q9CXE0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prdm5Q9CXE0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prdm5Q9CXE0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Prdm5Q9CXE0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prdm5Q9CXE0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Prdm5Q9CXE0 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Prdm5Q9CXE0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prdm5Q9CXE0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Prdm5Q9CXE0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.21■□□□□ 0.67
Prdm5Q9CXE0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prdm5Q9CXE0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prdm5Q9CXE0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prdm5Q9CXE0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prdm5Q9CXE0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Prdm5Q9CXE0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prdm5Q9CXE0 Gm9959-201ENSMUST00000068277 390 ntBASIC19.2■□□□□ 0.66
Prdm5Q9CXE0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prdm5Q9CXE0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prdm5Q9CXE0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prdm5Q9CXE0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.2■□□□□ 0.66
Prdm5Q9CXE0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prdm5Q9CXE0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Prdm5Q9CXE0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prdm5Q9CXE0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prdm5Q9CXE0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prdm5Q9CXE0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.19■□□□□ 0.66
Prdm5Q9CXE0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.19■□□□□ 0.66
Prdm5Q9CXE0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prdm5Q9CXE0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prdm5Q9CXE0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.19■□□□□ 0.66
Prdm5Q9CXE0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prdm5Q9CXE0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prdm5Q9CXE0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prdm5Q9CXE0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
Prdm5Q9CXE0 Gm14117-201ENSMUST00000122417 843 ntBASIC19.18■□□□□ 0.66
Prdm5Q9CXE0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.18■□□□□ 0.66
Prdm5Q9CXE0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.18■□□□□ 0.66
Prdm5Q9CXE0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prdm5Q9CXE0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.18■□□□□ 0.66
Prdm5Q9CXE0 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.17■□□□□ 0.66
Prdm5Q9CXE0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prdm5Q9CXE0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms