Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim8Q99PJ2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim8Q99PJ2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Trim8Q99PJ2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim8Q99PJ2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim8Q99PJ2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Trim8Q99PJ2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim8Q99PJ2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim8Q99PJ2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Trim8Q99PJ2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Trim8Q99PJ2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Trim8Q99PJ2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim8Q99PJ2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Trim8Q99PJ2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Trim8Q99PJ2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim8Q99PJ2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim8Q99PJ2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim8Q99PJ2 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Trim8Q99PJ2 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.94■□□□□ 0.78
Trim8Q99PJ2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim8Q99PJ2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim8Q99PJ2 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
Trim8Q99PJ2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim8Q99PJ2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim8Q99PJ2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.94■□□□□ 0.78
Trim8Q99PJ2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim8Q99PJ2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim8Q99PJ2 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim8Q99PJ2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim8Q99PJ2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim8Q99PJ2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim8Q99PJ2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim8Q99PJ2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim8Q99PJ2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim8Q99PJ2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.93■□□□□ 0.78
Trim8Q99PJ2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim8Q99PJ2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim8Q99PJ2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim8Q99PJ2 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim8Q99PJ2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim8Q99PJ2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.92■□□□□ 0.78
Trim8Q99PJ2 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.92■□□□□ 0.78
Trim8Q99PJ2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.92■□□□□ 0.78
Trim8Q99PJ2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim8Q99PJ2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.92■□□□□ 0.78
Trim8Q99PJ2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.92■□□□□ 0.78
Trim8Q99PJ2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim8Q99PJ2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim8Q99PJ2 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.92■□□□□ 0.78
Trim8Q99PJ2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Trim8Q99PJ2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim8Q99PJ2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Trim8Q99PJ2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim8Q99PJ2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim8Q99PJ2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.91■□□□□ 0.78
Trim8Q99PJ2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim8Q99PJ2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Trim8Q99PJ2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.9■□□□□ 0.78
Trim8Q99PJ2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim8Q99PJ2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim8Q99PJ2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.9■□□□□ 0.78
Trim8Q99PJ2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim8Q99PJ2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim8Q99PJ2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Trim8Q99PJ2 Gm10420-201ENSMUST00000121713 882 ntBASIC19.9■□□□□ 0.78
Trim8Q99PJ2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim8Q99PJ2 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim8Q99PJ2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim8Q99PJ2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim8Q99PJ2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim8Q99PJ2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Trim8Q99PJ2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Trim8Q99PJ2 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.89■□□□□ 0.77
Trim8Q99PJ2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim8Q99PJ2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim8Q99PJ2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim8Q99PJ2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Trim8Q99PJ2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.88■□□□□ 0.77
Trim8Q99PJ2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim8Q99PJ2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim8Q99PJ2 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.88■□□□□ 0.77
Trim8Q99PJ2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.88■□□□□ 0.77
Trim8Q99PJ2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim8Q99PJ2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Trim8Q99PJ2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim8Q99PJ2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim8Q99PJ2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim8Q99PJ2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim8Q99PJ2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim8Q99PJ2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Trim8Q99PJ2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim8Q99PJ2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim8Q99PJ2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim8Q99PJ2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim8Q99PJ2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Trim8Q99PJ2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Trim8Q99PJ2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim8Q99PJ2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim8Q99PJ2 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim8Q99PJ2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms